Primary Citation PubMed: 23314154
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Mycobacterium tuberculosis RsdA provides a conformational rationale for selective regulation of ?-factor activity by proteolysis.
(2013) Nucleic Acids Res 41
PubMed: 23314154 | PubMedCentral: PMC3597663 | DOI: 10.1093/nar/gks1468
Data, phasing and refinement statistics Crystal σ D 4 σ D 4 /RsdA PDB ID 3VFZ 3VEP Wavelength (Å) 0.978 0.978 Resolution (Å) a 33.88–1.90 (2.0–1.9) 49.8... –2.5 (2.64–2.50) Unit cell parameters (Å) a = 80.43, b = 35.70, c = 50.92 a = 99.74, b = 110.72, c = 73.13 β = 122.59 β = 133 Space group C121 C121 Total number of reflections a 69 206 (10 166) 139 525 (22 123) Number of unique reflections a 9711 (1422) 18 114 (2855) Completeness (%) a 99.6 (99.6) 98.3 (97.9) Multiplicity a 7.1 (7.1) 7.7 (7.7) R merge (%) a , b 6.2 (58.8) 6.8 (44.2) <I>/σ(I) a 17.9 (3.4) 15.6 (4.4) II.
ACCESSION NUMBERS 3VFZ, 3VEP.
Publication Year: 2013
PubMed ID is not available.
Published in 2015
Structure PDB References Source σ/anti-σ complex σ F domains2, 3, 4/FlgM 1SC5 X , 1RP3 X [ 54 ] D, b σ E domains2, 4/ChrR 2Z2S X , 2Q1Z X [ 55 ] J, c σ E domain... 2, 4/RseA 1OR7 X [ 56 ] A, c σ K domains2, 4/RskA 4NQW X [ 57 ] I, c σ F domain3/SpoIIAB 1L0O X [ 58 ] C, b σ 70 domain4/Rsd 2P7V X [ 59 ] A, a σ D domain4/RsdA 3VEP X [ 24 ] I, c σ L domain4/RslA 3HUG X [ 60 ] I, c Transcription factor complex αCTD–CAP–DNA 1LB2 X , 3N4M X [ 61 ] A αCTD–Spx 1Z3E X , 3GFK X , 3IHQ X [ 62 , 63 , 64 ] C αCTD–NusA (AR2) 2JZB N none H, A β subunit 1/2 domains–CarD 4KBM X [ 12 ] I β subunit 1 domain–TRCF 3MLQ X [ 65 ] B σ A domain4–λcI–DNA 1RIO X [ 66 ] B σ 70 domain4–PhoB–β flap–DNA 3T72 X [ 67 ] A Holoenzyme–CAP–DNA 3IYD C [ 68 ] A Core enzyme–GreA/Gfh1 4WQT X [ 45 ] B Elongation complex–Gfh1 3AOH X , 3AOI X [ 69 ] B Elongation complex –RapA 4S20 X [ 53 ] A Phage factor complex Holoenzyme–gp2 4LK0 X , 4LLG X [ 36 ] A β' subunit jaw domain–gp2 2LMC N [ 70 ] A β subunit flap domain–gp33 3TBI X [ 71 ] A Holoenzyme–gp39 3WOD X [ 72 ] B β subunit flap domain –gp39 3WOF X , 3WOE X [ 72 ] B σ 70 domain4–AsiA 1TLH N [ 17 ] A, a σ A domain4–gp67 4G8X X [ 73 ] K, a A: Escherichia coli ; B: Thermus aquatics/Thermus thermophilus ; C: Bacillus subtilis/Bacilus stearothermophilus ; D: Aquifex aeolicus ; H: Yersinia pseudotuberculosis ; I: Mycobacterium tuberculosis ; K: Staphyloccus aureus ; a: group I σ factor; b: group II σ factor; c: extracytoplasmic function (ECF) σ factor; X : X-ray crystallography method; C : Cryo-EM single-particle analysis method; N : NMR method.
Publication Year: 2015
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