Citations in PubMed

Primary Citation PubMed: 22366545 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 2

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Automating crystallographic structure solution and refinement of protein-ligand complexes.

(2014) Acta Crystallogr D Biol Crystallogr 70

PubMed: 24419387 | PubMedCentral: PMC3919266 | DOI: 10.1107/S139900471302748X

Protein PDB code d min (Å) Re-refined R work / R free Pipeline R work / R free Ligand r.m.s.d. (Å) Factor Xa 3ffg 1.54 0.156/0.186 0.159/0.197 0.25 3kqb 2.25 0.170/0.193 0.175/0.202 1.... 1 3kqc 2.20 0.165/0.197 0.172/0.209 0.93 3kqd 2.75 0.189/0.238 0.202/0.239 0.52 3kqe 2.35 0.173/0.213 0.182/0.227 0.77 Thrombin 3p17 1.43 0.126/0.157 0.140/0.161 0.93 3qto 1.52 0.144/0.158 0.156/0.172 0.06 3qtv 1.63 0.144/0.164 0.153/0.174 0.07 3qwc 1.74 0.145/0.168 0.152/0.177 P 3.69 0.151/0.173 C 0.08 3qx5 1.35 0.123/0.146 0.136/0.153 0.06 3sha 1.52 0.145/0.169 0.157/0.178 0.08 3shc 1.90 0.157/0.179 0.162/0.164 0.20 3si3 1.55 0.142/0.164 0.151/0.175 0.17 3si4 1.27 0.134/0.155 0.144/0.163 0.07 3sv2 1.30 0.136/0.163 0.150/0.172 0.09 HIV-1 protease 2fxd 1.60 0.181/0.205 0.216/0.247 0.13 2fxe 1.80 0.165/0.199 0.179/0.199 0.33 † † Single conformation only.

Publication Year: 2014


Automated identification of elemental ions in macromolecular crystal structures.

(2014) Acta Crystallogr D Biol Crystallogr 70

PubMed: 24699654 | PubMedCentral: PMC3975891 | DOI: 10.1107/S1399004714001308

In eight of the structures (PDB entries 3p17 , 3qto , 3qwc , 3sha , 3shc , 3si3 , 3si4 and 3sv2 ) both sodium ions were placed and identified in the final round of refinement (Fig. 5 ▶ ); in 3... x5 a single ion was placed.

Publication Year: 2014