Citations in PubMed

Primary Citation PubMed: 21106526 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 3

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Identification of novel potential ?-N-acetyl-D-hexosaminidase inhibitors by virtual screening, molecular dynamics simulation and MM-PBSA calculations.

(2012) Int J Mol Sci 13

PubMed: 22605995 | PubMedCentral: PMC3344231 | DOI: 10.3390/ijms13044545

Docking with Surflex-Dock The crystal structure of β- N -acetyl- d -hexosaminidase (OfHex1, 2.1 Å, 3NSN.

The selected lead-like compounds were subjected to a multistep docking-based simulation with the crystal structure of OfHex1 (3NSN.

The average 3D-structures of complexes were compared with the X-ray crystallographic structure of 3NSN ( Figure 4A–F ).

Top scoring compounds with poor binding mode inside the active site of the protein (pdb id: 3NSN) are indicated with arrows.

Publication Year: 2012

Structural insights into cellulolytic and chitinolytic enzymes revealing crucial residues of insect ?-N-acetyl-D-hexosaminidase.

(2012) PLoS One 7

PubMed: 23300622 | PubMedCentral: PMC3531433 | DOI: 10.1371/journal.pone.0052225

The PDB files of OfHex1 (3NSN), SmChb (1QBB) and SpHex (1HP5) were selected as inputted structures.

Results Structure Comparisons between BGlu1-cellotetraose and OfHex1-TMG-Chitotriomycin Structural comparisons between BGlu1-cellotetraose (PDB accession number: 3F5J) [7] and OfHex1-TMG-chitotriomycin (PDB accession number: 3NSN) [8] were performed to reveal structural differences and similarities.

OfHex1 (PDB accession number: 3NSN) and two bacterial β-N-acetyl-D-hexosaminidases, SmChb from S. marcescens (PDB accession number: 1QBB) [16] and SpHex from S. plicatus (PDB accession number: 1HP5) [17] , were selected as input structures.

Determination and Refinement of Structures The structure of mutant OfHex1 (E328A)-TMG-chitotriomycin complex was solved by molecular replacement with Molrep [23] using the structure of OfHex1-TMG-chitotriomycin complex (PDB accession number: 3NSN) as the search model.

Publication Year: 2012

A sperm-plasma ?-N-acetyl-D-hexosaminidase interacting with a Chitinolytic ?-N-Acetyl-D-hexosaminidase in insect molting fluid.

(2013) PLoS One 8

PubMed: 23951233 | PubMedCentral: PMC3741120 | DOI: 10.1371/journal.pone.0071738

The structure model of the catalytic domain of OfHex3 was built using the catalytic domain of OfHex1 (PDB ID: 3NSN) as a template and was validated using PROCHECK (89.8% of the residues were in the mo... t favored regions) and Verify_3D (93.4% of the residues had an average three- to one-dimensional score >0.2).

Publication Year: 2013