Primary Citation PubMed: 19109252
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Identification of crucial amino acids in mouse aldehyde oxidase 3 that determine substrate specificity.
(2013) PLoS One 8
PubMed: 24358164 | PubMedCentral: PMC3864932 | DOI: 10.1371/journal.pone.0082285
B, Stick representation of residues of desulfurated bXO (pdb:3EUB) corresponding to the amino acids in Panel A. C, Stick representation of residues in mAOX3 corresponding to the residues shown in Pane... D. Y885 builds hydrogen-bonds to the backbone of G1013 and K889, indicated by yellow dotted lines D, Stick representation of residues involved in a hydrogen network at the entrance to the active site of bXOR.
Publication Year: 2013
Structural data on the periplasmic aldehyde oxidoreductase PaoABC from Escherichia coli: SAXS and preliminary X-ray crystallography analysis.
(2014) Int J Mol Sci 15
PubMed: 24492481 | PubMedCentral: PMC3958847 | DOI: 10.3390/ijms15022223
For subunit A, 4-hydroxybenzoyl-CoA reductase from Thauera aromatica ( Ta HBRC, PDB code 1rm6) [ 33 ]), quinoline 2-oxidoreductase from Pseudomonas Putida 86 ( Pp QoR, PDB code 1t3q) [ 34 ] and carbon... monoxide dehydrogenase from Hydrogenophaga pseudoflava ( Hp CODH, PDB code 1ffu) were used; for subunit B, Ta HBCR, Hp CODH (PDB code 1ffu and 1ffv) were used; and for subunit C, Ta HBCR, Bos taurus xanthine oxidase complexed with xanthine (B t XO, PDB code 3eub) and reduced Bt XO in complex with arsenite (PDB code 3sr6) [ 35 ] were used as models.
Structure Solution Structure determination was performed with PHASER [ 37 ] using as molecular models the 4-hydroxybenzoyl-CoA reductase from Thauera aromática ( Ta HBRC, PDB code 1rm6) [ 33 ], Quinoline 2-Oxidoreductase from Pseudomonas Putida 86 ( Pp QoR, PDB code 1t3q) [ 34 ] and Carbon monoxide dehydrogenase from Hydrogenophaga pseudoflava ( Hp CODH, PDB code 1ffu) [ 51 ] for subunit A; Ta HBCR, hpCODH (PDB code 1ffu and 1ffv) for subunit B and, Ta HBCR, Desulfo-Xanthine Oxidase with xanthine (PDB code 3eub) [ 52 ] and reduced Xanthine Oxidase in complex with arsenite (PDB code 3sr6) [ 35 ] from Bos taurus for subunit C. Density modification protocols [ 53 ] were applied giving initial phases with ca 0.7 mean figure of merit.
Publication Year: 2014
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