Primary Citation PubMed: 18455733
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The amino terminal domain from Mrt4 protein can functionally replace the RNA binding domain of the ribosomal P0 protein.
(2009) Nucleic Acids Res 37
PubMed: 19346338 | PubMedCentral: PMC2699499 | DOI: 10.1093/nar/gkp209
The L12-RNA-Mrt4 and L12-RNA-P0 complexes were constructed by means of structural alignments using MAMMOTH ( 38 ) and with the G, I and 0 chains from PDB 3CC2 as a template.
The yeast ribosomal RNA stalk was modelled by mutating the fragment between residues 1145 and 1218 from the PDB 3CC2 chain 0 with the graphic software InsightII (Accelrys Software Inc., San Diego, CA, USA).
Publication Year: 2009
Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution.
(2013) Nucleic Acids Res 41
PubMed: 23222135 | PubMedCentral: PMC3553981 | DOI: 10.1093/nar/gks1259
A total of 27 proteins from the 50S subunit were modeled using archaeal X-ray H. marismortui protein templates (PDB 3cc2).
Publication Year: 2013
RNA tertiary interactions in a riboswitch stabilize the structure of a kink turn.
(2011) Structure 19
PubMed: 21893284 | PubMedCentral: PMC3651934 | DOI: 10.1016/j.str.2011.07.003
The backbone atoms (O5′, C5′, C4′, C3′, O3′, P and the nonbridging phosphate O) of the riboswitch k-turn structure (PDB file: 3gx5 ) ( Montange et al., ... 010 ) are superimposable with those of Haloarcula marismortui Kt-7 (PDB file: 3cc2 ) ( Blaha et al., 2008 ), with an rmsd of 1.4 Å.
Publication Year: 2011
Archaeal aminoacyl-tRNA synthetases interact with the ribosome to recycle tRNAs.
(2014) Nucleic Acids Res 42
PubMed: 24569352 | PubMedCentral: PMC4005694 | DOI: 10.1093/nar/gku164
The visualization was based on PDB IDs 4ADX ( 39 ), 3CC2 ( 40 ) and 3A1Y ( 41 ).
Publication Year: 2014
PubMed ID is not available.
Published in 2015
Blaha G , Gurel G , Schroeder SJ , Moore PB , Steitz TA , 2008 , The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for t... e 23S rRNA and Genome-derived Sequences for r-Proteins , http://www.rcsb.org/pdb/explore/explore.do?structureId=3CC2 , Publicly available at RCSB Protein Data Bank (Accession No: 3CC2).
The crystal structure, with kink-turn linker grafted from PDB ID 3CC2 ( Kladwang et al., 2012a ), is shown at right for comparison.
Publication Year: 2015
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