Citations in PubMed

Primary Citation PubMed: 19503104 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 16

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Structure of complement fragment C3b-factor H and implications for host protection by complement regulators.

(2009) Nat Immunol 10

PubMed: 19503104 | PubMedCentral: PMC2713992 | DOI: 10.1038/ni.1755

100941354 21750 Nat Immunol Nature immunology 1529-2908 1529-2916 19503104 2713992 10.1038/ni.1755 NIHMS117706 Article Structure of C3b-factor H and implications for host protection by complement regu... ators Wu Jin 1 Wu You-Qiang 2 Ricklin Daniel 2 Janssen Bert J.C. 1 Lambris John D. 2 3 Gros Piet 1 3 1 Crystal and Structural Chemistry, Bijvoet Center for Biomolecular Research, Department of Chemistry, Faculty of Science, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands 2 Department of Pathology & Laboratory Medicine, University of Pennsylvania, 401 Stellar Chance, Philadelphia, PA 19104, USA Correspondence Coordinates and structure factors of the C3b-FH(1–4) complex have been deposited in the Protein Data Bank with succession number 2WII.

Publication Year: 2009

The central portion of factor H (modules 10-15) is compact and contains a structurally deviant CCP module.

(2010) J Mol Biol 395

PubMed: 19835885 | PubMedCentral: PMC2806952 | DOI: 10.1016/j.jmb.2009.10.010

Discussion The structural biology of the N-terminal and C-terminal regions of fH that encompas the known binding sites for its principal protein and carbohydrate ligands, has been studied extensively;... the medium-resolution or high-resolution structures of all eight N-terminal CCPs have been experimentally determined {in fragments: fH1–2 [Protein Data Bank (PDB) ID 2RLP ], fH2–3 (PDB ID 2RLQ ), fH1–4 (PDB ID 2WII ), and fH5 and fH6–8 (PDB ID 2UWN )} by NMR or crystallography, as have structures of four of the C-terminal six modules [fH15–16 (PDB ID 1HFH ) and fH19–20 (PDB IDs 2BZM and 2G7I )].

Publication Year: 2010

Structure of the extracellular portion of CD46 provides insights into its interactions with complement proteins and pathogens.

(2010) PLoS Pathog 6

PubMed: 20941397 | PubMedCentral: PMC2947992 | DOI: 10.1371/journal.ppat.1001122

The structures of CD46-4D (red) and FH (PDB code 2WII, blue) [42] were superimposed based on residues in SCR3 only.

Publication Year: 2010

Disease-associated N-terminal complement factor H mutations perturb cofactor and decay-accelerating activities.

(2011) J Biol Chem 286

PubMed: 21270465 | PubMedCentral: PMC3064162 | DOI: 10.1074/jbc.M110.211839

c , location of Arg 53 , Ile 62 , and Arg 78 within the co-crystal structure ( 57 ) of a CFH1–4·C3b complex (Protein Data Base ID code 2WII ).

Publication Year: 2011

Structures of the rat complement regulator CrrY.

(2011) Acta Crystallogr Sect F Struct Biol Cryst Commun 67

PubMed: 21795784 | PubMedCentral: PMC3144786 | DOI: 10.1107/S1744309111016551

Shown are fH 1–4 from the crystal structure of its complex with C3b (PDB entry 2wii ), CrrY 1–4 and CD55 1–4 (from PDB entry 1ojv ).

( b ) Overlay of the crystal structures of CrrY 1–4 (PDB entries 2xrb and 2xrd ; rainbow coloured) on the structure of fH 1–4 from the C3b–fH 1–4 binary complex (PDB entry 2wii ; Wu et al. , 2009 ▶ ; grey).

( c ) Overlay of CrrY 1–4 (blue, this work) and CD46 1–4 (orange; PDB entry 3o8e ; Persson et al. , 2010 ▶ ) on the crystal structure of the complex between fH 1–4 and C3b (PDB entry 2wii ).

Publication Year: 2011

Structural analysis of the C-terminal region (modules 18-20) of complement regulator factor H (FH).

(2012) PLoS One 7

PubMed: 22389686 | PubMedCentral: PMC3289644 | DOI: 10.1371/journal.pone.0032187

A, Superposition of FH18–20 structure (PDB ID: 3SW0) on the previously determined wild-type FH19–20:C3d complex (PDB ID: 3OXU [18] ) and the FH1–4:C3b complex (PDB ID: 2WII [15... ).

Publication Year: 2012

Structural basis for engagement by complement factor H of C3b on a self surface.

(2011) Nat Struct Mol Biol 18

PubMed: 21317894 | PubMedCentral: PMC3512577 | DOI: 10.1038/nsmb.2018

Extrapolation to a C3b:FH1–4:FH19–20 complex The very good superposition of the C3d polypeptide within the C3d:FH19–20 complex onto the relevant residues of the TED domain with... n the crystal structure of the C3b:FH1–4 complex (PDB accession code: 2WII 14 ) is shown in Figure 5 .

Publication Year: 2011

The two sides of complement C3d: evolution of electrostatics in a link between innate and adaptive immunity.

(2012) PLoS Comput Biol 8

PubMed: 23300422 | PubMedCentral: PMC3531323 | DOI: 10.1371/journal.pcbi.1002840

Ribbon representations are used for the host ligands: FH 4 – white (PDB: 2WII); FH 19/20 – gray (PDB: 2XQW); CR2 – black (PDB: 3OED).

Publication Year: 2012

Microbes bind complement inhibitor factor H via a common site.

(2013) PLoS Pathog 9

PubMed: 23637600 | PubMedCentral: PMC3630169 | DOI: 10.1371/journal.ppat.1003308

Color code: C3b (2WII, [44] ) is shown in blue and its C3d part (TED domain) is darker blue with the thioester site in orange (1C3d, [7] ); a microbial protein is shown in yellow; FH19-20 is shown in ... rey (2g7i, [8] ).

Publication Year: 2013

Zinc-induced self-association of complement C3b and Factor H: implications for inflammation and age-related macular degeneration.

(2013) J Biol Chem 288

PubMed: 23661701 | PubMedCentral: PMC3696691 | DOI: 10.1074/jbc.M113.476143

C and D , the crystal structure of C3b with SCR-1/4 of FH is shown as a schematics form and as a molecular structure (PDB code 2WII ) to which SCR-5/20 from the folded-back solution structure of FH SC... -1/20 (PDB code 3GAV ; R. Nan, unpublished modeling) is added to indicate their interaction.

Publication Year: 2013

Identification of a rare coding variant in complement 3 associated with age-related macular degeneration.

(2013) Nat Genet 45

PubMed: 24036949 | PubMedCentral: PMC3812337 | DOI: 10.1038/ng.2758

The CFH residues 987–1230 were used to generate the structure using the first four Sushi domains from 2wii as a structural template (shown in pink, with cysteine residue side chains in yellow)...

The fragment of the crystal structure of the four Sushi domains (purple in figure, one not shown for clarity) of CFH in a complex with complement fragment C3b (PDB file: 2wii) was used to explore the effect of disease associated nonsynonymous changes.

Publication Year: 2013

Investigating the structure of the factor B vWF-A domain/CD55 protein-protein complex using DEER spectroscopy: successes and pitfalls.

(2013) Mol Phys 111

PubMed: 24954957 | PubMedCentral: PMC4056885 | DOI: 10.1080/00268976.2013.827754

From the crystal-lographic structures (2WII, 2WIN, 1OJV), it is possible to construct a hypothetical model for the CD55:vWF-A structure whereby the Bb would simply dissociate from the C3b and attach t... the neighbouring CD55 ( Figure 3(A), (B) and (C) ) [ 24 , 33 , 34 ].

Comparison of the DEER distance results to a previously proposed model for the CD55:vWF-A interaction Published crystal structures of the first four domains of factor H, another regulator of complement, bound to C3b (2WII.

Publication Year: 2013

New functional and structural insights from updated mutational databases for complement factor H, Factor I, membrane cofactor protein and C3.

(2014) Biosci Rep 34

PubMed: 25188723 | PubMedCentral: PMC4206863 | DOI: 10.1042/BSR20140117

These were SCR-1/4 (PDB code 2WII), SCR-5, SCR-6/8 (PDB code 2V8E), SCR-10/11 (PDB code 4B2R), SCR-11/12 (PDB code 4B2S), SCR-12/13 (PDB code 2KMS), SCR-15/16 (PDB code 1HFI), SCR-18/20 (PDB code 3SW0... and SCR-19/20 (PDB code 2G7I) [ 72 – 79 ].

Publication Year: 2014

A revised mechanism for the activation of complement C3 to C3b: a molecular explanation of a disease-associated polymorphism.

(2015) J Biol Chem 290

PubMed: 25488663 | PubMedCentral: PMC4303685 | DOI: 10.1074/jbc.M114.605691

The four C3b crystal structures used here have Protein Data Bank codes of 2I07 , 2WIN , 2WII , and 2ICF .

Publication Year: 2015

PubMed ID is not available.

Published in 2015

PubMedCentral: PMC4423893

(A) A structural model of the complex of C3b and short consensus repeat (SCR) 1–4 of CFH (ID: 2WII).

The crystal structures of the complexes of C3b/CFH-SCR1-4 (ID: 2WII) and C3d/CFH-SCR19-20 (ID: 3OXU) were retrieved from the Protein Data Bank ( ) [ 26 , 27 ].

Publication Year: 2015

PubMed ID is not available.

Published in 2015

PubMedCentral: PMC4503813

(a) Cartoon diagram (two views) of C3b in complex with the four SCRs of FH (PDB 2WII) and with MCP (3O8E) aligned at SCR3 with respect to FH.

Publication Year: 2015