Primary Citation PubMed: 18020435
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Co-crystalization and in vitro biological characterization of 5-aryl-4-(5-substituted-2-4-dihydroxyphenyl)-1,2,3-thiadiazole Hsp90 inhibitors.
(2012) PLoS One 7
PubMed: 22984537 | PubMedCentral: PMC3439374 | DOI: 10.1371/journal.pone.0044642
For a variety of pyrazole and isoxazole inhibitors the conformation of the loop is either in an open (pdb 2BYI and 2BYH) or compact conformation (pdb 2CCU, 2VCJ, 2CCT, 2CCS, 2BSM and 2BT0).
Publication Year: 2012
In Silico Studies on Fungal Metabolite against Skin Cancer Protein (4,5-Diarylisoxazole HSP90 Chaperone).
(2012) ISRN Dermatol 2012
PubMed: 22991673 | PubMedCentral: PMC3443584 | DOI: 10.5402/2012/626214
Retrieval of Protein Structure The target 4,5 diarylisoxazole HSP90 chaperone protein (PDB ID: 2VCJ), having the resolution of 2.0 Å, was retrieved from the protein data bank (PDB) ( h... tp://www.rcsb.org/pdb/ ).
Identification, design and bio-evaluation of novel Hsp90 inhibitors by ligand-based virtual screening.
(2013) PLoS One 8
PubMed: 23565147 | PubMedCentral: PMC3615092 | DOI: 10.1371/journal.pone.0059315
For further evaluation of the quality of the generated Pharmacophore model, we selected the crystal structure of Hsp90-ligand complex (id: 2vcj) from the Protein Data Bank (PDB).
The conformation of the ligand 2EQ (PDB ID: 2vcj) that fitted (Map Ligands to Pharmacophore protocol, ‘best fit’ option) to Hypo1 was compared to the originally bound conformation ( Figure 6 ).
Additionally, we implemented the pharmacophore model into the active site of Hsp90 crystal structure (PDB id: 2vcj, Figure 7 ).
Publication Year: 2013
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