Primary Citation PubMed: 17435768
Citations in PubMed
This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.
Data mentions are occurrences of PDB IDs in the full text articles from the
PubMedCentral Open Access Subset
of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed.
Article titles can be filtered by keywords and sorted by year.
Modular organization and combinatorial energetics of proline-tyrosine nuclear localization signals.
(2008) PLoS Biol 6
PubMed: 18532879 | PubMedCentral: PMC2408616 | DOI: 10.1371/journal.pbio.0060137
(C) Interactions between Kapβ2 (pink) and the N-terminal basic motif of hnRNP M (blue) (PDB ID 2OT8).
Publication Year: 2008
FUS-NLS/Transportin 1 complex structure provides insights into the nuclear targeting mechanism of FUS and the implications in ALS.
(2012) PLoS One 7
PubMed: 23056579 | PubMedCentral: PMC3466232 | DOI: 10.1371/journal.pone.0047056
Figure S2A shows the superimposition of region I (E523–R524–P525–Y526, the PY motif) of FUS-NLS with the corresponding motif in hnRNP D-NLS (Y352–K353–P354... 13;Y355; PDB code: 2Z5N), hnRNP M-NLS (F61–E62–P63–Y64; PDB code: 2OT8), hnRNP A1-NLS (S286–G287–P288–Y289; PDB code: 2H4M) and TAP-NLS (Y72–N73–P74–Y75; PDB code: 2Z5K).
(C) The superimposition of residues 508–526 of FUS-NLS (yellow; PDB code: 4FQ3) with the corresponding regions from hnRNP A1-NLS (blue; PDB code: 2H4M), hnRNP D-NLS (grey; PDB code: 2Z5N), hnRNP M-NLS (magenta; PDB code: 2OT8), and TAP-NLS (cyan; PDB code: 2Z5K).
Figure S2 Structural properties of the PY fragments of the FUS-NLS (region I) and the other PY-NLS’s. (A) Structural alignment of the PY fragments of the FUS-NLS (yellow; PDB code 4FQ3), hnRNP A1-NLS (blue; PDB code 2H4M), hnRNP D-NLS (grey; PDB code 2Z5N), hnRNP M-NLS (magenta; PDB code 2OT8), and TAP-NLS (cyan; PDB code 2Z5K).
When the Trn1 structure determined in this study (PDB code: 4FQ3) was superimposed onto that in the Trn1/hnRNP A1-NLS, Trn1/hnRNP D-NLS, Trn1/hnRNP M-NLS and Trn1/TAP-NLS complexes (PDB codes: 2H4M, 2Z5N, 2OT8 and 2Z5K)  –  , the atomic r.m.s.d. values are 6.05 Å, 3.15 Å, 3.62 Å and 3.31 Å, respectively.
Several structures of Trn1 in complex with the PY NLS from proteins such as hnRNP A1-NLS (PDB code: 2H4M  ), hnRNP M-NLS (PDB code: 2OT8  ), hnRNP D-NLS and TAP-NLS (PDB codes: 2Z5N and 2Z5K  ) have been determined.
Publication Year: 2012
Functional and genomic analyses of alpha-solenoid proteins.
(2013) PLoS One 8
PubMed: 24278209 | PubMedCentral: PMC3837014 | DOI: 10.1371/journal.pone.0079894
Function Interaction PDB ID Protein name Type Reference Protein transport P/P 2JDQ Importin subunit alpha-1 ARM  Protein transport P/P 1IAL Importin subunit alpha-2/pendulin ARM  Protein trans... ort P/P 1IBR Importin subunit beta-1/importin 90 HEAT  Protein transport P/P 2OT8 Transportin-1 (Importin beta-2) HEAT  Protein transport P/P 1WA5 Re-exporter of importin subunit alpha HEAT  TF coactivators P/P 2Z6H Catenin beta-1 ARM  TF coactivators P/P 3OC3 Helicase MOT1 HEAT  Protein biosynthesis P/N?
Publication Year: 2013
The RCSB PDB (citation) is managed by two members of the Research Collaboratory for Structural Bioinformatics: Rutgers and UCSD/SDSC
RCSB PDB is a member of the
The RCSB PDB is funded by a grant (DBI-1338415) from the
National Science Foundation, the
National Institutes of Health, and the
US Department of Energy.