Citations in PubMed

Primary Citation PubMed: 15299346 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 4

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Molecular basis for the lack of enantioselectivity of human 3-phosphoglycerate kinase.

(2008) Nucleic Acids Res 36

PubMed: 18463139 | PubMedCentral: PMC2441801 | DOI: 10.1093/nar/gkn212

( A ) dCK (PDB entry 2NO1), ( B ) TMPK (PDB entry 1E2D), ( C ) UMP/CMPK (PDB entry 2UKD), ( D ) NADH-bound liver alcohol dehydrogenase [PDB entry 2OHX ( 38 )], ( E ) hPGK C-domain and ( F ) hPGK N-dom... in.

Publication Year: 2008


Wanted: unique names for unique atom positions. PDB-wide analysis of diastereotopic atom names of small molecules containing diphosphate.

(2008) BMC Bioinformatics 9 Suppl 9

PubMed: 18793461 | PubMedCentral: PMC2537567 | DOI: 10.1186/1471-2105-9-S9-S16

Both molecules of NAD shown are from an alcohol dehydrogenase structure [PDB: 2OHX ][ 16 ].

One example is an X-ray crystal structure of alcohol dehydrogenase [PDB: 2OHX ] [ 16 ].

Figure 2 NAD molecules from X-ray crystal structure 2OHX .

Publication Year: 2008


Interacting with the biomolecular solvent accessible surface via a haptic feedback device.

(2009) BMC Struct Biol 9

PubMed: 19860901 | PubMedCentral: PMC2774689 | DOI: 10.1186/1472-6807-9-69

The other structure analysed was a closed form of LADH bound to NAD (PDB: 2OHX ) [ 13 ].

Publication Year: 2009


On the evolutionary conservation of hydrogen bonds made by buried polar amino acids: the hidden joists, braces and trusses of protein architecture.

(2010) BMC Evol Biol 10

PubMed: 20513243 | PubMedCentral: PMC2892493 | DOI: 10.1186/1471-2148-10-161

I) Cysteine hydrogen bonding back to N-terminal residues in the alcohol dehydrogenase family [PDB: 2ohx ].

Two examples of aspartates hydrogen bonding back to N-terminal residues as well as to coils in the C) alcohol dehydrogenases [PDB: 2ohx ] and D) matrix metalloproteinases [PDB: 1hfc ].

Examples of coils that are supported by hydrogen bonds from polar residues at the end of central strands, including A) an aspartate in the aldehyde oxidase and xanthine dehydrogenases (domains 3&4) [PDB: 1n62 ], two glutamates in B) the alcohol dehydrogenases [PDB: 2ohx ] and C) the isocitrate and isopropylmalate dehydrogenases [PDB: 1cnz ] and D) an arginine in the serine proteinase inhibitor family [PDB: 1hle ].

Two examples of arginines forming hydrogen bonds to polyproline helices in A) the α/β hydrolases [PDB: 2bce ] and B) the alcohol dehydrogenases - polyproline interaction on the right [PDB: 2ohx ].

Publication Year: 2010