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The DynaMine webserver: predicting protein dynamics from sequence.
(2014) Nucleic Acids Res 42
PubMed: 24728994 | PubMedCentral: PMC4086073 | DOI: 10.1093/nar/gku270
Prediction for the glucagon peptide as available from the webserver with added annotation for the secondary structure as seen by NMR in a lipidated analogue in water (2M5Q, red) and TFE (2M5P, blue), ... nd by X-ray diffraction in an analogue with substitutions (1BHO, brown).
A comparison with three different structures from the PDB reveals that the predictions remain valid in this case: a lipidated analogue (red, 2M5P) in water adopts helix from residues 15–19 and 21–26, which relate well to two peaks above the ‘ordered’ threshold.
Publication Year: 2014
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