Citations in PubMed

Primary Citation PubMed: 16901787 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 3

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Modular organization and combinatorial energetics of proline-tyrosine nuclear localization signals.

(2008) PLoS Biol 6

PubMed: 18532879 | PubMedCentral: PMC2408616 | DOI: 10.1371/journal.pbio.0060137

(B) Interactions between Kapβ2 (pink) and the N-terminal hydrophobic motif of hnRNP A1 (yellow) (PDB ID 2H4M) drawn with PYMOL [ 67 ].

Publication Year: 2008

FUS-NLS/Transportin 1 complex structure provides insights into the nuclear targeting mechanism of FUS and the implications in ALS.

(2012) PLoS One 7

PubMed: 23056579 | PubMedCentral: PMC3466232 | DOI: 10.1371/journal.pone.0047056

(C) The superimposition of residues 508–526 of FUS-NLS (yellow; PDB code: 4FQ3) with the corresponding regions from hnRNP A1-NLS (blue; PDB code: 2H4M), hnRNP D-NLS (grey; PDB code: 2Z5N), hnR... P M-NLS (magenta; PDB code: 2OT8), and TAP-NLS (cyan; PDB code: 2Z5K).

Figure S2 Structural properties of the PY fragments of the FUS-NLS (region I) and the other PY-NLS’s. (A) Structural alignment of the PY fragments of the FUS-NLS (yellow; PDB code 4FQ3), hnRNP A1-NLS (blue; PDB code 2H4M), hnRNP D-NLS (grey; PDB code 2Z5N), hnRNP M-NLS (magenta; PDB code 2OT8), and TAP-NLS (cyan; PDB code 2Z5K).

When the Trn1 structure determined in this study (PDB code: 4FQ3) was superimposed onto that in the Trn1/hnRNP A1-NLS, Trn1/hnRNP D-NLS, Trn1/hnRNP M-NLS and Trn1/TAP-NLS complexes (PDB codes: 2H4M, 2Z5N, 2OT8 and 2Z5K) [13] – [15] , the atomic r.m.s.d. values are 6.05 Å, 3.15 Å, 3.62 Å and 3.31 Å, respectively.

Several structures of Trn1 in complex with the PY NLS from proteins such as hnRNP A1-NLS (PDB code: 2H4M [13] ), hnRNP M-NLS (PDB code: 2OT8 [14] ), hnRNP D-NLS and TAP-NLS (PDB codes: 2Z5N and 2Z5K [15] ) have been determined.

Figure S2A shows the superimposition of region I (E523–R524–P525–Y526, the PY motif) of FUS-NLS with the corresponding motif in hnRNP D-NLS (Y352–K353–P354–Y355; PDB code: 2Z5N), hnRNP M-NLS (F61–E62–P63–Y64; PDB code: 2OT8), hnRNP A1-NLS (S286–G287–P288–Y289; PDB code: 2H4M) and TAP-NLS (Y72–N73–P74–Y75; PDB code: 2Z5K).

Publication Year: 2012

Structure and function of cohesin's Scc3/SA regulatory subunit.

(2014) FEBS Lett 588

PubMed: 25171859 | PubMedCentral: PMC4175184 | DOI: 10.1016/j.febslet.2014.08.015

Another example from a long list of possible partial structural alignments is transportin 1 (PDB 2H4M , Fig. 1-fig.

Publication Year: 2014