Primary Citation PubMed: 16373399
Citations in PubMed
This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.
Data mentions are occurrences of PDB IDs in the full text articles from the
PubMedCentral Open Access Subset
of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed.
Article titles can be filtered by keywords and sorted by year.
Identification of PPARgamma partial agonists of natural origin (I): development of a virtual screening procedure and in vitro validation.
(2012) PLoS One 7
PubMed: 23226391 | PubMedCentral: PMC3511273 | DOI: 10.1371/journal.pone.0050816
The poses that passed the pharmacophore and docking screenings were submitted to an electrostatic/shape similarity analysis, using the experimental poses of the PPARγ partial agonists crystall... zed at the structures 2G0H, 4PRG, 2Q5S, 2FVJ and 2Q6S as queries.
Full agonists Partial agonists cluster 1 cluster 2 cluster 3 cluster 4 cluster 5 1FM9 1I7I 1FM6 2GTK 2G0G 4PRG 2Q6R 2FVJ 2Q6S 1RDT 1KNU 1ZGY 3B3K 2G0H 2Q61 2WM0 1K74 2F4B 2PRG 2ATH 2Q5S 3BC5 2HWQ 2FVJ 1NYX 2Q5P 2Q8S 2HWR 1ZEO 2HFP 2P4Y Generation of Structure-Based Pharmacophores LigandScout v2.03 (Inte:ligand, Vienna, Austria, http://www.inteligand.com/ligandscout/ )  ,  was used for the analysis of the 31 PPARγ structures from Table 5 and the analysis of the possible interactions between the crystallized ligands and the ligand-binding pocket of PPARγ.
Publication Year: 2012
Identification of PPARgamma partial agonists of natural origin (II): in silico prediction in natural extracts with known antidiabetic activity.
(2013) PLoS One 8
PubMed: 23405231 | PubMedCentral: PMC3566095 | DOI: 10.1371/journal.pone.0055889
The aligned poses that passed the pharmacophore and docking screenings were submitted to an electrostatic/shape similarity analysis, using the PPARγ partial agonists crystallized in the struct... res 2G0H, 4PRG, 2Q5S, 2FVJ and 2Q6S as a queries.
Publication Year: 2013
RCSB PDB (citation) is managed by two members of the Research Collaboratory for Structural Bioinformatics: Rutgers and UCSD/SDSC
RCSB PDB is a member of the
The RCSB PDB is funded by a grant (DBI-1338415) from the
National Science Foundation, the
National Institutes of Health, and the
US Department of Energy.