Primary Citation PubMed: 5069789
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Generating triangulated macromolecular surfaces by Euclidean Distance Transform.
(2009) PLoS One 4
PubMed: 19956577 | PubMedCentral: PMC2779860 | DOI: 10.1371/journal.pone.0008140
of cavities/cavity volume (in Å 3 ) EDTSurf LSMS MSMS 2act 218 14/533.00 16/514.66 18/573.858 2cha 248 7/347.44 19/529.91 20/587.81 2lyz 129 5/220.76 6/190.47 11/274.44 2ptn 230 7/411.29 14/60... .94 20/680.45 5mbn 154 4/168.41 8/298.52 13/293.94 8tln 318 14/441.75 29/642.06 42/942.91 In Table 4 , we calculate the volumes of seven cavities in the disordered domain of trypsinogen (PDB ID: 2ptn).
Publication Year: 2009
The Protein Data Bank archive as an open data resource.
(2014) J Comput Aided Mol Des 28
PubMed: 25062767 | PubMedCentral: PMC4196035 | DOI: 10.1007/s10822-014-9770-y
Early structures included myoglobin ( 1 PDB ID 1mbn [ 6 , 7 ]), the first structure solved by X-ray crystallography, and small enzymes ( 2 top 4pti [ 48 ], bottom right 2cha [ 49 ], bottom left 3cpa [... 50 ]).
Publication Year: 2014
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