Primary Citation PubMed: 16584182
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Role of the C-terminal domain in the structure and function of tetrameric sodium channels.
(2013) Nat Commun 4
PubMed: 24051986 | PubMedCentral: PMC3791462 | DOI: 10.1038/ncomms3465
The structure of the CTD was first modelled assuming that the entire CTD was a coiled-coil, using residues 9–22 from PDBID 2CCE 28 as a template ( Supplementary Fig.
Publication Year: 2013
Parallel implementation of 3D protein structure similarity searches using a GPU and the CUDA.
(2014) J Mol Model 20
PubMed: 24481593 | PubMedCentral: PMC3936136 | DOI: 10.1007/s00894-014-2067-1
Table 1 Query protein structures used in the performance tests PDB ID Chain Length PDB ID Chain Length 2CCE A 29 1AYE _ 400 2A2B A 40 2EPO B 600 1BE3 G 80 1KK7 A 802 1A1A B 101 1URJ A 1027 1AYY B 142 ... PDA A 1230 2RAS A 199 2R93 A 1421 1TA3 B 300 2PFF B 2005 Tests were performed using different qualification thresholds ( Q T = 0.01, 0.2, 0.4, 0.6, 0.8) that the structures had to attain for them to pass from the first phase to the second phase of CASSERT.
Publication Year: 2014
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