Citations in PubMed

Primary Citation PubMed: 15955819 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 5

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

  • 3 per page
  • 5 per page
  • 10 per page
  • view all
  • Publication Year
  • Ascending
  • Descending

Antiviral therapy for hepatitis C virus: beyond the standard of care.

(2010) Viruses 2

PubMed: 21994657 | PubMedCentral: PMC3185663 | DOI: 10.3390/v2040826

The superimposed structures are 1GX6 (active site with UTP), 2BRK (with benzimidazole in thumb domain site 1), 1OS5 (with dihydropyranone in thumb domain 2 site), 1YVF (with benzothiadiazine in palm d... main site 1), 3FQL (with benzofuran in the palm domain site 2).

Publication Year: 2010

Structure based virtual screening of inhibitors for binding at the allosteric site of HCV RNA dependent RNA polymerase.

(2012) Bioinformation 8

PubMed: 23055616 | PubMedCentral: PMC3449378 | DOI: 10.6026/97320630008716

Methodology The 3D structure of HCV NS5B bounded with an allosteric inhibitor were retrieved from Protein databank (PDB), accession code 2BRK was found to bound to an allosteric inhibitor named compou... d 1.

Publication Year: 2012

Multiple virtual screening approaches for finding new hepatitis C virus RNA-dependent RNA polymerase inhibitors: structure-based screens and molecular dynamics for the pursue of new poly pharmacological inhibitors.

(2012) BMC Bioinformatics 13 Suppl 17

PubMed: 23282180 | PubMedCentral: PMC3521232 | DOI: 10.1186/1471-2105-13-S17-S5

However, we list the PDB codes and method of comparison below: Thumb I: All available thumb I inhibitors (e.g. benzimedazoles [ 35 ]) crystal structures in PDB were obtained (PDB ID: 2BRK , 2BRL , 2DX... , 2WCX , 2XWY , 3MWW ) Palm I: Three main chemical classes were discerned for the Palm I site, nominally: beznothiazoles (PDB ID: 3D5M , 3H5S , 3H5U ), benzothiadiazines (PDB ID: 3CWJ , 2FVC , 2GIQ , 3BR9 , 3BSA , 3BSC , 3CDE , 3CO9 , 3CVK , 3E51 , 3G86 , 3GYN , 3H2L , 3H59 , 3H98 , 3HHK ) and benzodiazepines (PDB ID: 3CSO , 3GNV , 3GNW , 3GOL ) Palm II Site: The PDB files 3FQK and 3FQL complexes with the HCV-796 inhibitor in both coordinates.

Publication Year: 2012

Selection of conserved epitopes from hepatitis C virus for pan-populational stimulation of T-cell responses.

(2013) Clin Dev Immunol 2013

PubMed: 24348677 | PubMedCentral: PMC3856138 | DOI: 10.1155/2013/601943

The HCV epitope TIMAKNEVF maps onto HCV polymerase (PDB: 2BRK) (c).

Publication Year: 2013

PubMed ID is not available.

Published in 2015

PubMedCentral: PMC4383224

The crystal structures of NS5B are present in the Protein Data Bank with 2WCX, 33 2BRL, 2BRK, 34 2XWY, 35 and 2DXS 36 codes.

Publication Year: 2015