Primary Citation PubMed: 16131756
Citations in PubMed
This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.
Data mentions are occurrences of PDB IDs in the full text articles from the
PubMedCentral Open Access Subset
of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed.
Article titles can be filtered by keywords and sorted by year.
From screen to structure with a harvestable microfluidic device.
(2011) Acta Crystallogr Sect F Struct Biol Cryst Commun 67
PubMed: 21821908 | PubMedCentral: PMC3151141 | DOI: 10.1107/S1744309111024456
This crystal form was isomorphous to 11 structures previously deposited in the Protein Data Bank ( 1lr3 , 1rqw , 2blr , 2blu , 2d8p , 2g4y , 2oqn , 2vi2 , 3dzp , 3dzr and 3e0a ).
As observed in the thaumatin structure reported here, no density was observed for the C-terminal alanine in PDB entries 2blr and 2blu .
Publication Year: 2011
PubMed ID is not available.
Published in 2015
Table 1 The low- and high-dose structures of six protein crystals (Nanao et al. , 2005 ▶ ) Elastase Insulin Lysozyme Ribonuclease A Thaumatin Trypsin PDB structure before burn 2blo 2... n3 2blx 2blp 2blr 2blv Dose per dataset Gy Gy Gy Gy Gy Gy Dose X-ray burn Gy Gy Gy Gy Gy Gy PDB structure after burn 2blq 2bn1 2bly 2blz 2blu 2blw Number of CYS/TYR/ASP/GLU/MET residues 8/11/8/4/2 6/4/0/4/0 8/3/7/2/2 8/6/5/5/4 16/8/12/6/1 12/10/6/4/2 Table 2 Number of PDB structures in different stages of the selection process Proteins structures Steps in the selection process 11836 Initial selection by PDB search 31 (0.3%) Could not be processed by PDBCUR 23 (0.2%) Could not be processed by ParsePDB (PDB file contains multiple models) 6 (0.1%) Could not be processed by ParsePDB (PDB file curation errors) 4 (0.0%) Curating errors regarding disulfide bond declarations 65 (0.5%) Could not be processed by STRIDE 0 (0.0%) Could not be processed by JOY / PSA 11707 (98.9%) Structures successfully processed 2704 Non-redundant structures selected by PISCES 61 Structures resulting from room-temperature diffraction experiments 2643 Structures used in this study Table 3 Slopes of simple linear regression models predicting B Damage from solvent accessibility for selected atoms of the Nanao et al. (2005 ▶ ) datasets and the PDB dataset The intercept values are not shown.
Publication Year: 2015
RCSB PDB (citation) is managed by two members of the Research Collaboratory for Structural Bioinformatics: Rutgers and UCSD/SDSC
RCSB PDB is a member of the
The RCSB PDB is funded by a grant (DBI-1338415) from the
National Science Foundation, the
National Institutes of Health, and the
US Department of Energy.