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Amyloidogenic determinants are usually not buried.
(2009) BMC Struct Biol 9
PubMed: 19589171 | PubMedCentral: PMC2714319 | DOI: 10.1186/1472-6807-9-44
In this respect, it interesting to note that, the peptide VEALYL, which appears in the crystal structure of insulin (PDB ID 1ZNJ , chain B, residues 12–17) adopts an α-helical conforma... ion, with Leu(15) buried into the hydrophobic interior of the insulin monomer (chains A and B), whereas, when crystallized alone, forms a steric zipper, class 7 (see [ 31 ]), adopting an extended β-strand conformation.
These 5 protein models, (see also Additional file 2 ), which were produced utilizing PyMOL [ 34 ] are: (H) Immunoglobulin κ-4 light chain (PDB ID: 1LVE ); (I) Superoxide dismutase ( 2C9V ); (J) Immunoglobulin G1 heavy chain ( 1HZH ); (K) Insulin ( 1ZNJ ); (L) Cystatin C ( 1R4C ).
Publication Year: 2009
Engineering of therapeutic proteins production in Escherichia coli.
(2011) Curr Pharm Biotechnol 12
PubMed: 21050165 | PubMedCentral: PMC3179032 | DOI: null
The image was prepared from the 1znj PDB file using WebLab Viewer software.
Publication Year: 2011
MoMA-LigPath: a web server to simulate protein-ligand unbinding.
(2013) Nucleic Acids Res 41
PubMed: 23671332 | PubMedCentral: PMC3692135 | DOI: 10.1093/nar/gkt380
The structure of the R 6 insulin hexamer, determined by radiographic crystallography, is available in the Protein Data Bank ( 22 ), with PDB ID: 1ZNJ.
Publication Year: 2013
Insight into the structural and biological relevance of the T/R transition of the N-terminus of the B-chain in human insulin.
(2014) Biochemistry 53
PubMed: 24819248 | PubMedCentral: PMC4047818 | DOI: 10.1021/bi500073z
In contrast, GlyB8 in the R-state has negative φ angles (approximately −67°, as in PDB entry 1znj) and occupies the left half-segment of the Ramachandran plot characteristic of... a right-handed α-helix (Figure S1 of the Supporting Information ).
Publication Year: 2014
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