Primary Citation PubMed: 15095869
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CO rebinding kinetics and molecular dynamics simulations highlight dynamic regulation of internal cavities in human cytoglobin.
(2013) PLoS One 8
PubMed: 23308092 | PubMedCentral: PMC3537629 | DOI: 10.1371/journal.pone.0049770
Representation of the root-mean square fluctuations (Å) of residues for the five simulated systems: Cygb h (from 1UT0), Cygb p (from HE7Q mutant and 3AG0), and O 2 Cygb (from HE7Q mutant and 3... G0).
Cygb h was modelled using as template the X-ray structure 1UT0 (solved at 2.40 Å)  .
The overall fold of the three X-ray structures (1UT0, 3AG0 and the HE7Q Cygb* mutant) is very similar, as noted in a root-mean square deviation (rmsd) of the backbone C α atoms in the range 0.5–0.7 Å.
Comparisons of the CD loop and the E-helix as observed in the crystal structures of the HE7Q Cygb*-cyanide complex (gray ribbon) and (left) the Cygb* in the endogenous bis-histidyl hexacoordinated state (1UT0 subunit A, orange ribbon) or (right) Cygb* in the pentacoordinated state (1UT0 subunit B, magenta ribbon).
Publication Year: 2013
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