Primary Citation PubMed: 15107837
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K70Q adds high-level tenofovir resistance to "Q151M complex" HIV reverse transcriptase through the enhanced discrimination mechanism.
(2011) PLoS One 6
PubMed: 21249155 | PubMedCentral: PMC3020970 | DOI: 10.1371/journal.pone.0016242
The starting protein coordinates were from the crystal structure of HIV-1 RT in complex with DNA template/primer and TFV-DP (PDB file 1T05)  .
Publication Year: 2011
Binding sensitivity of adefovir to the polymerase from different genotypes of HBV: molecular modeling, docking and dynamics simulation studies.
(2013) Acta Pharmacol Sin 34
PubMed: 23202802 | PubMedCentral: PMC4011611 | DOI: 10.1038/aps.2012.146
Because the complexed ligand, TDV, is a methyl derivative of ADV, the complexed structure of HIV-RT/TDV (PDB ID: 1T05) was selected as the template 30 .
Docking studies of ADV diphosphate (ADV-DP) with HBV polymerase genotypes B and C The superposition of the two docked complexes with the crystal protein, 1T05, suggests that the ADV-DP was docked into the active site with favorable poses, both bearing a close resemblance to the pose of the analogous ligand, TDV-DP, in 1T05.
Figure 3 (A) Overall view of superposition of template structure 1T05 (magenta ribbon) with HBV polymerase genotype B (cyan) and C (green) model structures from homology modeling, ligand ADV-DP and two Mg 2+ ions are highlighted in magenta and gray.
Publication Year: 2013
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