Primary Citation PubMed: 15454080
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A computational analysis of ATP binding of SV40 large tumor antigen helicase motor.
(2009) PLoS Comput Biol 5
PubMed: 19779548 | PubMedCentral: PMC2739275 | DOI: 10.1371/journal.pcbi.1000514
Results Overall structure of SV40 LTag helicase domain There are three high-resolution LTag hexameric helicase structures corresponding to different nucleotide bound states  , namel... , the Apo state (PDB ID 1svo), the ATP bound state (PDB ID 1svm) and ADP bound state (PDB ID 1svl).
Publication Year: 2009
DNA translocation activity of the multifunctional replication protein ORF904 from the archaeal plasmid pRN1.
(2009) Nucleic Acids Res 37
PubMed: 19762479 | PubMedCentral: PMC2777425 | DOI: 10.1093/nar/gkp742
( A and B ) Top and side view of the SV40 large T-antigen hexamer (PDB 1SVM).
Papilloma virus type 18 (PDB 1TUE, amino acids 460–595, yellow), adenoassociated virus 2 (PDB 1S9H, amino acids 309–450, light grey) and Simian Virus 40 large T antigen (PDB: 1SVM, amino acids 400–546, cyan).
Elements in nucleotide sensing and hydrolysis of the AAA+ disaggregation machine ClpB: a structure-based mechanistic dissection of a molecular motor.
(2014) Acta Crystallogr D Biol Crystallogr 70
PubMed: 24531492 | PubMedCentral: PMC3940203 | DOI: 10.1107/S1399004713030629
Similarly, the distance between the nucleotide and the sensor 1 asparagine side chain ranges from 3.1 Å for SV40 LTag (PDB entry 1svm ; Gai et al. , 2004 ▶ ) to 6.0 ... 00c5; for p97 (PBD entry 3cf1 ; Davies et al. , 2008 ▶ ), and is 4.6 Å in the case of ClpB NBD2.
Publication Year: 2014
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