Citations in PubMed

Primary Citation PubMed: 15313620 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 4

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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In silico identification of functional divergence between the multiple groEL gene paralogs in Chlamydiae.

(2007) BMC Evol Biol 7

PubMed: 17519003 | PubMedCentral: PMC1892554 | DOI: 10.1186/1471-2148-7-81

B) Three-dimensional structure of one of the Escherichia coli GroEL homo-tetradecamer protein structure (PDB accession number: 1SS8).

Publication Year: 2007


Tracing conformational changes in proteins.

(2010) BMC Struct Biol 10 Suppl 1

PubMed: 20487508 | PubMedCentral: PMC2873824 | DOI: 10.1186/1472-6807-10-S1-S1

Figure 1 GroEL (a) The GroEL complex (PDB structure 1ss8).

We modeled the epical domain movement from the GroEL monomer (modeled from chain A of PDB code 1SS8) to the GroEL-GroES-ADP7 monomer (modeled from chain A of PDB code 1SX4).

Figure 1 shows an illustration of the closed structure of the GroEL 7-membered single ring complex taken from PDB code 1SS8 (Figure 1(a) ) and the opened structure (GroEL-GroES-ADP7) taken from PDB code 1SX4 (Figure 1(b) ).

Publication Year: 2010


Conformational sampling and nucleotide-dependent transitions of the GroEL subunit probed by unbiased molecular dynamics simulations.

(2011) PLoS Comput Biol 7

PubMed: 21423709 | PubMedCentral: PMC3053311 | DOI: 10.1371/journal.pcbi.1002004

A total of 21 crystal structures (287 GroEL subunits) were kept for further analysis (PDB-codes: 1PCQ, 1PF9, 1SVT, 3C9V, 1AON, 1GRU, 1MNF, 1XCK, 2C7D, 2NWC, 3E76, 2EU1, 1SS8, 1SX3, 1J4Z, 1KPO, 2C7E, 1... P8, 1OEL, 1WE3, 1WF4).

Contact matrices were calculated for 28 closed (T) apo subunits (PDB code: 1XCK, 1SS8, 1OEL), 28 closed (T) ATP bound subunits (PDB code: 1KP8, 1SX3) and 28 open (R″) ADP bound subunits (PDB codes: 1AON, 1SVT, 1SX4, and 1PF9), and 6000 snapshots obtained from the last 50 ns of the 12 independent MD simulations on the closed GroEL subunit (6 apo and 6 holo).

Publication Year: 2011


Adsorption characteristics of an enteric virus-binding protein to norovirus, rotavirus and poliovirus.

(2011) BMC Biotechnol 11

PubMed: 22176631 | PubMedCentral: PMC3262155 | DOI: 10.1186/1472-6750-11-123

Figure 6 Tertiary structure of the GroEL complex [PDB: 1SS8 ] .

Publication Year: 2011