Primary Citation PubMed: 14568530
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Molecular modeling and characterization of Vibrio cholerae transcription regulator HlyU.
(2006) BMC Struct Biol 6
PubMed: 17116251 | PubMedCentral: PMC1665450 | DOI: 10.1186/1472-6807-6-24
INBGU scored CzrA from Staphylococcus aureus (PDB entry: 1r1u) as the best template, which was CadC from Staphylococcus aureus pI258 (PDB entry: 1u2w) according to mGENETHREADER.
Homology modeling and data analysis After careful examination of potential templates the structure of SmtB from Synechococcus PCC7942 (PDB entry: 1smt) [ 31 ], CzrA from Staphylococcus aureus (PDB entry: 1r1u) [ 67 ], and CadC from Staphylococcus aureus pI258 (PDB entry: 1u2w) [ 33 ] were selected for homology modeling.
101 1 × 10 -20 58 Proteins with known 3D structure a PDB code: 1u2w Cadmium efflux system accessory protein CadC Staphylococcus aureus 46.2 2 × 10 -06 34 PDB code: 1r1u Repressor protein CzrA b Staphylococcus aureus 45.4 3 × 10 -06 33 PDB code: 1smt Transcriptional repressor SmtB b Synechococcus sp.
Publication Year: 2006
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