Primary Citation PubMed: 10574802
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Origin and evolution of the archaeo-eukaryotic primase superfamily and related palm-domain proteins: structural insights and new members.
(2005) Nucleic Acids Res 33
PubMed: 16027112 | PubMedCentral: PMC1176014 | DOI: 10.1093/nar/gki702
The structural and topology diagrams were derived from the following PDB IDs: 1V33, 1G71 ( 8 ), 1RNI ( 25 ), 1M55 ( 59 ), 1F08 ( 54 ), 1QUV ( 92 ), 1MML ( 93 ), 1TGO ( 94 ), 1TAQ ( 95 ) and 1FX2 ( 96 ... .
Publication Year: 2005
The modeled structure of the RNA dependent RNA polymerase of GBV-C virus suggests a role for motif E in Flaviviridae RNA polymerases.
(2005) BMC Bioinformatics 6
PubMed: 16225688 | PubMedCentral: PMC1283970 | DOI: 10.1186/1471-2105-6-255
The three dimensional model of the GBV-C RdRp was constructed using the crystal structure coordinates of the HCV polymerase [ 8 , 7 ] (PDB code: 1GX5, 1QUV).
A cell-based assay for RNA synthesis by the HCV polymerase reveals new insights on mechanism of polymerase inhibitors and modulation by NS5A.
(2011) PLoS One 6
PubMed: 21799903 | PubMedCentral: PMC3142182 | DOI: 10.1371/journal.pone.0022575
The 1b polymerase is shown in a cross section (PDB: 1QUV) and M414 is denoted in red color and motif C GDD from residues 317–319 is in gold.
Publication Year: 2011
Inhibition of RNA binding to hepatitis C virus RNA-dependent RNA polymerase: a new mechanism for antiviral intervention.
(2014) Nucleic Acids Res 42
PubMed: 25053847 | PubMedCentral: PMC4132742 | DOI: 10.1093/nar/gku632
Superimposition of common backbone atoms with the previously reported apopolymerase structure of NS5B (PDB 1QUV ( 7 )) gave root mean square deviation values of 0.59 Å, suggesting that quercet... getin binding does not involve significant conformational adjustments of the protein.
Publication Year: 2014
A ligand-observed mass spectrometry approach integrated into the fragment based lead discovery pipeline.
(2015) Sci Rep 5
PubMed: 25666181 | PubMedCentral: PMC4322365 | DOI: 10.1038/srep08361
The NS5B structure was solved by molecular replacement using NS5B (1QUV) as the search model.
Publication Year: 2015
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