Citations in PubMed

Primary Citation PubMed: 10366505 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 5

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

  • 3 per page
  • 5 per page
  • 10 per page
  • view all
  • Publication Year
  • Ascending
  • Descending

RNA:(guanine-N2) methyltransferases RsmC/RsmD and their homologs revisited--bioinformatic analysis and prediction of the active site based on the uncharacterized Mj0882 protein structure.

(2002) BMC Bioinformatics 3

PubMed: 11929612 | PubMedCentral: PMC102759 | DOI: null

DNA:m 6 A MTases: M.Taq I (1g38 in PDB) [ 29 ] in yellow, M.Rsr I (leg2) [ 55 ] in red, M.Dpn M (2dpm) [ 56 ] in green; RNA:m 6 A MTase ErmC' (1qao) [ 24 ] in blue; DNA:m 4 C MTase M.Pvu II (1boo) [ 5... ] in cyan; Mj0882 (1dus) in magenta.

Publication Year: 2002

Natural history of S-adenosylmethionine-binding proteins.

(2005) BMC Struct Biol 5

PubMed: 16225687 | PubMedCentral: PMC1282579 | DOI: 10.1186/1472-6807-5-19

Structural similarity between SPOUT-fold and Rossmann-fold methyltransferases (i.e. DALI Z-score = 3.1 for 88 aa with RMSD = 3.7 and sequence identity = 17% for PDB structures 1QAO and 1MXI ) is confi... ed mainly to the N-terminal half of those folds.

Publication Year: 2005

Sequence and structural evolution of the KsgA/Dim1 methyltransferase family.

(2008) BMC Res Notes 1

PubMed: 18959795 | PubMedCentral: PMC2614427 | DOI: 10.1186/1756-0500-1-108

SAM was modeled into the KsgA active site by using the co-crystal structure of ErmC' in complex with SAM ( 1QAO [ 23 ]) as a guide.

Publication Year: 2008

Rosetta in CAPRI rounds 13-19.

(2010) Proteins 78

PubMed: 20597089 | PubMedCentral: PMC2952713 | DOI: 10.1002/prot.22784

Instead, the SAM moiety was transformed to adopt a binding mode similar to that in the ErmC′ structure (PDB entry: 1QAO 8 ); full-atom refinement was performed under the Rosetta energy functio... augmented with restraints that preserved hydrogen bonding and packing interactions, analogous to those observed for ErmC′.

Publication Year: 2010

Structural basis for S-adenosylmethionine binding and methyltransferase activity by mitochondrial transcription factor B1.

(2013) Nucleic Acids Res 41

PubMed: 23804760 | PubMedCentral: PMC3763538 | DOI: 10.1093/nar/gkt547

Shown are another adenine N6-specific rRNA methyltransferase [ErmC′; yellow; PDB 1QAO; ( 44 )], a large rRNA subunit methyltransferase [NSUN4, beige; PDB 4FZV; ( 45 )], a tRNA methyltransferas... [Trm14; pink; PDB 3TM4; ( 46 )], a DNA methyltransferase [MTaqI; brown; PBD 2ADM; ( 47 )] and a small-molecule methyltransferase [COMT, green; PDB 1VID ( 48 )].

Publication Year: 2013