Citations in PubMed

Primary Citation PubMed: 14573869 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 2

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Accurate prediction of DnaK-peptide binding via homology modelling and experimental data.

(2009) PLoS Comput Biol 5

PubMed: 19696878 | PubMedCentral: PMC2717214 | DOI: 10.1371/journal.pcbi.1000475

Structures of DnaK in complex with a substrate peptide were gathered from an NMR ensemble (PDB code 1Q5L) [15] and from different crystal structures (PDB codes 1DKX and 1DKY, of which ... he latter is a DnaK dimer with monomers A and B) [5] .

The MCC of structure 1DKX was the highest as compared to 1DKY (A and B) and was above the MCCs of three randomly picked NMR structures from the ensemble 1Q5L ( Table 1 and Figure 3 ).

Publication Year: 2009

Using steered molecular dynamics to predict and assess Hsp70 substrate-binding domain mutants that alter prion propagation.

(2013) PLoS Comput Biol 9

PubMed: 23382668 | PubMedCentral: PMC3561046 | DOI: 10.1371/journal.pcbi.1002896

Materials and Methods Model construction In this study we used the solution structure of the substrate-binding domain from bacterial Hsp70 chaperone protein DnaK (393–507) in complex with the ... eptide NRLLLTG, obtained from the RCSD protein data bank (PDB code: 1Q5L) [21] as representing wild type protein.

Publication Year: 2013