Citations in PubMed

Primary Citation PubMed: 14988501 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 3

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Antibody-protein interactions: benchmark datasets and prediction tools evaluation.

(2007) BMC Struct Biol 7

PubMed: 17910770 | PubMedCentral: PMC2174481 | DOI: 10.1186/1472-6807-7-64

The authors of a few structures clearly stated in their papers that antibody-protein contacts in the complexes were different: [PDB: 1MLC, 1NFD, 1OB1, 1P2C, 1QFW].

Publication Year: 2007


Prediction of antigenic epitopes on protein surfaces by consensus scoring.

(2009) BMC Bioinformatics 10

PubMed: 19772615 | PubMedCentral: PMC2761409 | DOI: 10.1186/1471-2105-10-302

Methods Protein datasets Protein Dataset 1 48 antigen-antibody complexes with resolution <3.0 Å were selected from the 59 representative antigen-antibody complexes compiled by Ponomare... ko and Bourne[ 25 ]: 2ADF , 1FE8 , 1BGX , 1E6J , 1EGJ , 1FSK , 1H0D , 1IQD , 1JRH , 1LK3 , 1MHP , 1NL0 , 1NSN , 1OAZ , 1ORS , 1PKQ , 1RJL , 1SY6 , 1TZI , 1WEJ , 1YJD , 1YY9 , 1ZTX , 2JEL , 1A14 , 1NCA , 1BVK , 1JHL , 1NDG , 1P2C , 1JPS , 1AR1 , 1EO8 , 1QFU , 1EZV , 1OSP , 1FJ1 , 1FNS , 1G9M , 1R3J , 1N8Z , 1NFD , 1TQB , 2VDL , 1V7M , 1XIW , 2AEP , and 1R0A .

Publication Year: 2009


Improving B-cell epitope prediction and its application to global antibody-antigen docking.

(2014) Bioinformatics 30

PubMed: 24753488 | PubMedCentral: PMC4207425 | DOI: 10.1093/bioinformatics/btu190

There are five standard (non-camelid) antibody–lysozyme complexes available in the PDB [we chose representatives: 1a2y, 1j1x, 1jhl, 1p2c and 2iff by clustering by sequence identity (99%) and r... moving any with missing binding site residues or high B-factors.

Publication Year: 2014