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Evolution of acetylcholinesterase and butyrylcholinesterase in the vertebrates: an atypical butyrylcholinesterase from the Medaka Oryzias latipes.
(2011) PLoS One 6
PubMed: 21364766 | PubMedCentral: PMC3045457 | DOI: 10.1371/journal.pone.0017396
g009 Figure 9 Active site gorges of H. sapiens BChE (hBChE; pdb code 1p0i), T. californica AChE ( Tc AChE; pdb code 1ea5) and a homology model of O. latipes atypical BChE ( Ol BChE).
A 3D structural model of medaka AChE was built by using the crystal structures of H. sapiens BChE (pdb code 1p0i), T. californica AChE (pdb code 1ea5) and D. melanogaster AChE (pdb code 1dx4) as structural templates.
Publication Year: 2011
Molecular basis of inhibitory activities of berberine against pathogenic enzymes in Alzheimer's disease.
(2012) ScientificWorldJournal 2012
PubMed: 22262957 | PubMedCentral: PMC3259606 | DOI: 10.1100/2012/823201
Structural Models Structure coordinates for AChE, BChE, MAO-A, and MAO-B were taken from the Protein Data Bank (PDB codes: 1EA5 [ 23 ], 1P0I [ 24 ], 1O5 W [ 25 ], and 1GOS [ 26 ], resp.)
Publication Year: 2012
2,3-dihydro-1H-cyclopenta[b]quinoline derivatives as acetylcholinesterase inhibitors-synthesis, radiolabeling and biodistribution.
(2012) Int J Mol Sci 13
PubMed: 22949848 | PubMedCentral: PMC3431846 | DOI: 10.3390/ijms130810067
Ligands were bound to acetylcholinesterase from 2CKM and butyrylcholinesterase from 1P0I crystal complex.
Structure-based search for new inhibitors of cholinesterases.
(2013) Int J Mol Sci 14
PubMed: 23478436 | PubMedCentral: PMC3634507 | DOI: 10.3390/ijms14035608
Butyrylcholinesterase The enzyme structure (PDB: 1P0I [ 34 ]) was prepared for docking with Gold 4.1 [ 36 ].
Figure 3 Active site of butyrylcholinesterase (human butyrylcholinesterase (hBuChE), PDB: 1P0I).
Publication Year: 2013
Synthesis and biological evaluation of 1, 3-dihydroxyxanthone mannich base derivatives as anticholinesterase agents.
(2013) Chem Cent J 7
PubMed: 23622085 | PubMedCentral: PMC3673835 | DOI: 10.1186/1752-153X-7-78
The PDB codes of 3D crystal structures of human AChE and BuChE are 1EVE and 1P0I, respectively.
Pharmacophore-based virtual screening and density functional theory approach to identifying novel butyrylcholinesterase inhibitors.
(2012) Acta Pharmacol Sin 33
PubMed: 22684028 | PubMedCentral: PMC4077067 | DOI: 10.1038/aps.2012.21
The 3D crystal structure of BChE (PDB code: 1P0I) was downloaded from Protein Data Bank (PDB, www.rcsb.org) with good resolution (2 Å).
PubMed ID is not available.
Published in 2014
For WT hBChE and the Y332S variant, the presence of S P GB3N in the active site stabilized the conformation found in the crystal structure of PDB entry 1P0I, 18 whereas the unbound D340H and Y332S/D34... H hBCHE variants showed an rmsd similar to that of the crystal structure of PDB entry 1P0I.
17 The structure of hBChE used for docking studies was taken from the crystal structure of hBChE [Protein Data Bank (PDB) entry 1P0I] 18 after removal of the ligands of crystallization [i.e., butanoic acid, l -fucose, glycerol, 2-( N -morpholino)ethanesulfonic acid, and sulfate], water, and salts with a PyMol Molecular Graphics System (version 1.4.1, Schrödinger, LLC, San Diego, CA).
The starting topology was built using the coordinates of the docked structure of hBChE (PDB entry 1P0I).
The distance between variant residues Y332 and D340 and the active site S198 was 17 Å for the S198–Y332 pair and 25 Å for the S198–D340 pair in the crystal structure of hBChE (PDB entry 1P0I).
Figure 3 (A) Root-mean-square deviation (rmsd) of the backbone atoms (carbonyl carbon, C; α-carbon, CA; nitrogen, N) from the starting structure (PDB entry 1P0I) as a function of time (nanoseconds), for MD simulations of the WT and hBChE variants.
Publication Year: 2014
Characterization of a novel BCHE "silent" allele: point mutation (p.Val204Asp) causes loss of activity and prolonged apnea with suxamethonium.
(2014) PLoS One 9
PubMed: 25054547 | PubMedCentral: PMC4108472 | DOI: 10.1371/journal.pone.0101552
Molecular dynamics study Model structures for wild type (usual BChE) and p.Val204Asp mutant were prepared from the X-ray coordinates of PDB ID 1P0I  as described in our previous studies  , [19... .
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