Citations in PubMed

Primary Citation PubMed: 12933793 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 1

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

  • 3 per page
  • 5 per page
  • 10 per page
  • view all
  • Publication Year
  • Ascending
  • Descending

Cholera- and anthrax-like toxins are among several new ADP-ribosyltransferases.

(2010) PLoS Comput Biol 6

PubMed: 21170356 | PubMedCentral: PMC3000352 | DOI: 10.1371/journal.pcbi.1001029

PDB IDs: Iota (1GIQ), Art2.2 (1OG3), C3stau2 (1OJZ), Vip2 (1QS1), C3bot2 (1R45), C3bot1 (2A9K), SpvB (2GWL), C2-I (2J3X), CdtA (2WN7), C3lim (3BW8).

We modeled NAD + -bound structures using MODELLER and alignments to an NAD + -bound template: C3bot1 (PDB 2A9K) [108] , Iota toxin (PDB 1GIQ) [33] , SpvB (PDB 2GWL) [109] , EDIN-B (PDB 1OJZ) [110] , CdtA (PDB 2WN7) [111] , Art2.2 (PDB 1OG3) [112] , Vip2 (PDB 1QS2) [39] and cholera toxin (PDB 2A5F) [113] .

Function prediction: NAD + binding We assessed NAD + binding using crystal structures solved with NAD + in the active site: C3bot1 (PDB 2A9K) [108] , Iota toxin (PDB 1GIQ) [33] , SpvB (PDB 2GWL) [109] , EDIN-B (PDB 1OJZ) [110] , CdtA (PDB 2WN7) [111] , Art2.2 (PDB 1OG3) [112] , Vip2 (PDB 1QS2) [39] and cholera toxin (PDB 2A5F) [113] .

As for NAD + binding we used 3DLOGO [120] to reveal equivalent positions in these structures: C3bot1 (PDB 2A9K), Iota toxin (PDB 1GIQ), SpvB (PDB 2GWL), EDIN-B (PDB 1OJZ), Art2.2 (PDB 1OG3), Vip2 (PDB 1QS2) and cholera toxin (PDB 2A5F).

Publication Year: 2010