Citations in PubMed

Primary Citation PubMed: 12639952 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 1

Citations in PubMed

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PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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PubMed ID is not available.

Published in 2015

PubMedCentral: PMC4489240

Performance evaluation of CSI 3.0 on 13 selected proteins Protein ID Number of residues Q3 score (H,B,C) Q6 score (I,I′,II,II′,VIII turns, non-turns) Q3 score (edge/interior β-... trand, non-strand) Q2 score (β-hairpins, non-hairpins) Ubiquitin (Human) PDB: 1UBQ; BMRB: 5387 76 99 100 98 99 GB1 domain ( Streptococcus ) PDB: 1GB1; BMRB: 7280 58 96 100 91 96 Parvalbumin (Human) PDB: 1RK9; BMRB: 6049 110 97 100 100 95 Dinitrogenase (Thermotoga Mortima) PDB: 1O13; BMRB: 6198 124 97 100 85 97 Cyclic nucleotide protein (M. loti) PDB:1VP6; BMRB:15249 142 98 100 90 94 Glutaredoxin (Poxvirus) PDB: 2HZE; BMRB: 4113 108 100 100 96 100 SH3 domain Myo3 (Yeast) PDB: 1RUW; BMRB:6197 70 100 97 80 100 Acyltransferase ( Arabidopsis thaliana ) PDB: 1XMT; BMRB: 6338 103 96 100 93 98 Cytosine Deaminase (Yeast) PDB: 1YSB; BMRB: 6223 158 96 100 95 NA Sortase A ( Staphylococcus ) PDB: 1T2W; BMRB:4879 148 91 97 85 95 Peptidyl-tRNA hydrolase ( Mycobacterium tuberculosis ) PDB: 2Z2I; BMRB: 7055 191 96 97 97 100 Photoactive Yellow Protein ( Hoeflea halophila ) PDB: 1ODV; BMRB: 6321 100 100 96 80 100 Calmodulin (Bovine) PDB: 1A29; BMRB: 547 148 96 100 98 NA This table shows that, as expected, the agreement between the per-residue secondary structure assignments derived by chemical shifts matches very well to those determined by analyzing the coordinate data.

Publication Year: 2015