Primary Citation PubMed: 12551896
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Grb7 SH2 domain structure and interactions with a cyclic peptide inhibitor of cancer cell migration and proliferation.
(2007) BMC Struct Biol 7
PubMed: 17894853 | PubMedCentral: PMC2131756 | DOI: 10.1186/1472-6807-7-58
Initial phases were obtained using MOLREP [ 67 ] and the co-ordinates of the Grb10 SH2 domain dimer as the search model (PDB:1NRV, [ 36 ]).
Comparison with other SH2 domains and the Grb7 SH2 NMR derived structure The Grb7 SH2 domain superposes with Grb14 (PDB:2AUG; [ 37 ]) and Grb 10 (PDB:1NRV; [ 36 ]) SH2 domains, across Grb7 SH2 residues 431–523, with α-carbon r.m.s.d.s of 1.24 Å and 0.88 Å respectively.
This was achieved using molecular replacement, employing the crystal structure of the Grb10γ SH2 as a search model (PDB:1NRV [ 36 ]).
Publication Year: 2007
Computational protein design: validation and possible relevance as a tool for homology searching and fold recognition.
(2010) PLoS One 5
PubMed: 20463972 | PubMedCentral: PMC2864755 | DOI: 10.1371/journal.pone.0010410
Results are shown for designed, native and HMM sequences, for two SH3 domains (1CKA, 1CSK), two SH2 domains (1SHD,1NRV), and two PDZ domains (1QAU, 2FE5).
Publication Year: 2010
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