Citations in PubMed

Primary Citation PubMed: 12740607 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 3

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

  • 3 per page
  • 5 per page
  • 10 per page
  • view all
  • Publication Year
  • Ascending
  • Descending

Antibody-protein interactions: benchmark datasets and prediction tools evaluation.

(2007) BMC Struct Biol 7

PubMed: 17910770 | PubMedCentral: PMC2174481 | DOI: 10.1186/1472-6807-7-64

Some epitopes, for example, HyHEL-8 on HEL [PDB:1NDG] and 8–18C5 on myelin oligodendrocyte glycoprotein [PDB:1PKQ], were predicted by all methods except CEP (Table 2 ).

Publication Year: 2007


Prediction of antigenic epitopes on protein surfaces by consensus scoring.

(2009) BMC Bioinformatics 10

PubMed: 19772615 | PubMedCentral: PMC2761409 | DOI: 10.1186/1471-2105-10-302

Methods Protein datasets Protein Dataset 1 48 antigen-antibody complexes with resolution <3.0 Å were selected from the 59 representative antigen-antibody complexes compiled by Ponomare... ko and Bourne[ 25 ]: 2ADF , 1FE8 , 1BGX , 1E6J , 1EGJ , 1FSK , 1H0D , 1IQD , 1JRH , 1LK3 , 1MHP , 1NL0 , 1NSN , 1OAZ , 1ORS , 1PKQ , 1RJL , 1SY6 , 1TZI , 1WEJ , 1YJD , 1YY9 , 1ZTX , 2JEL , 1A14 , 1NCA , 1BVK , 1JHL , 1NDG , 1P2C , 1JPS , 1AR1 , 1EO8 , 1QFU , 1EZV , 1OSP , 1FJ1 , 1FNS , 1G9M , 1R3J , 1N8Z , 1NFD , 1TQB , 2VDL , 1V7M , 1XIW , 2AEP , and 1R0A .

Publication Year: 2009


Structure of allergens and structure based epitope predictions.

(2014) Methods 66

PubMed: 23891546 | PubMedCentral: PMC3969231 | DOI: 10.1016/j.ymeth.2013.07.024

For the following discussion the structures PDB: 1NDG [117] and PDB: 3RVW [115] were chosen as HEL-Ab and Der p 1-Ab representatives, respectively.

PDB codes are HEL (hen egg-white lysozyme): 1NDG, Bet v 1: 1FSK, Api m 2 (bee venom hyaluronidase): 2J88, BLG (β-lactoglobulin): 2R56, Bla g 2: 2NR6, Phl p 2: 2VXQ, Der f 1: 3RVV.

Publication Year: 2014