Citations in PubMed

Primary Citation PubMed: 12401788 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 3

Citations in PubMed

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PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Asymmetry in the burial of hydrophobic residues along the histone chains of eukarya, archaea and a transcription factor.

(2005) BMC Struct Biol 5

PubMed: 16242031 | PubMedCentral: PMC1283977 | DOI: 10.1186/1472-6807-5-20

Table 5 lists the correlation coefficients for three histone-like dimers from the transcription factors of, TFIID [ 11 ], NF_Y [ 18 ] (PDB id; 1N1J), and NC2 [ 19 ] (PDB id 1JFI).

One is from the hetero-trimeric transcription factor, NF-Y [ 18 ] (PDB id 1N1J), and the other is from the ternary complex of the negative cofactor 2, NC2 [ 19 ] (PDB id 1JFI)).

Publication Year: 2005


The CCAAT-binding complex coordinates the oxidative stress response in eukaryotes.

(2010) Nucleic Acids Res 38

PubMed: 19965775 | PubMedCentral: PMC2831313 | DOI: 10.1093/nar/gkp1091

( B ) Homology model of the HapC/HapE subcomplex based on the NF-YB/NF-YC structure (PDB accession code 1N1J).

Publication Year: 2010


Classification of heterodimer interfaces using docking models and construction of scoring functions for the complex structure prediction.

(2009) Adv Appl Bioinform Chem 2

PubMed: 21918618 | PubMedCentral: PMC3169947 | DOI: null

Supplementary data Table S1 Heterodimer entries not used to construct the scoring functions PDBID a Chain 1 Chain 2 Residue 1 b Residue 2 c 1b0n A B 111 57 1dce C D 567 331 1dev C D 196 41 1e44 B A 96... 85 1euc B A 396 311 1euv A B 211 86 1f2t A B 149 148 1f34 A B 326 149 1f3u F E 171 118 1f60 A B 458 94 1fs0 G E 230 138 1g8k F E 825 133 1gk9 B A 557 260 1go3 M N 187 107 1gzs A B 180 165 1h0h A B 977 214 1h1r A B 303 258 1h9h * E I 223 36 1hfe M T 421 123 1i2m B A 402 216 1izn A B 286 277 1jdh A B 529 38 1jkg B A 250 140 1jlt A B 122 122 1ka9 F H 252 200 1kfu L S 699 184 1ld8 B A 437 382 1lp1 A B 58 58 1m1e A B 538 81 1mtp A B 323 43 1mu2 A B 555 426 1n1j B A 97 93 1nf3 A C 195 128 1o94 D C 320 264 1o97 D C 320 264 1oo0 A B 147 110 1or7 B F 194 90 1p5v A B 235 147 1q7l A B 198 88 1r8o A B 96 71 1rp3 G H 239 88 1s9d E A 203 164 1tqy G H 424 415 1ubk L S 534 267 1ugp B A 226 203 1vet B A 125 124 1vf6 B D 83 72 6req C D 727 637 Notes: a The entry with * 1h9h, failed in the energy minimization.

Publication Year: 2009