Citations in PubMed

Primary Citation PubMed: 12461176 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 3

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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The BARD1 C-terminal domain structure and interactions with polyadenylation factor CstF-50.

(2008) Biochemistry 47

PubMed: 18842000 | PubMedCentral: PMC2654182 | DOI: 10.1021/bi801115g

Using SITUS 60 , the X-ray crystal structure of a three-repeat designed consensus ankyrin domain 61 , PDB ID 1N0Q , was automatically docked into the SAXS envelope.

(B) Three repeat ankyrin domain (PDB ID 1N0Q ) docked using SITUS into the GASBOR envelope of BARD1 (423−553).

The SAXS data yields a D max of 50 Å for BARD1 (423−553), consistent with D max of 49−52 Å for four repeat ankyrin structures (PDB ID 1DCQ , 1N0R , 1S70 , 1YCS ) and significantly larger than the D max of 40 Å for a three repeat ankyrin structure (PDB ID 1N0Q ).

Publication Year: 2008


On the use of logarithmic scales for analysis of diffraction data.

(2009) Acta Crystallogr D Biol Crystallogr 65

PubMed: 19966414 | PubMedCentral: PMC2789003 | DOI: 10.1107/S0907444909039638

R (mvd, set 5) ( R PDB ) ( R ) ( R free ) ( R free R ) 0.67 2vb1 2vb1   0.0911 0.1090 0.1175 0.0089 0.670.76 1yk4 1r6j 2pve 0.1035 0.1199 0.1317 0.0121 0.760.87 2ol9 2h5c 2h5c 0.1158 0.1307 0.... 459 0.0153 0.871.00 1ob7 1rb9 1ixb 0.1281 0.1416 0.1601 0.0185 1.001.14 1iro 1iro 1z3n 0.1405 0.1525 0.1742 0.0217 1.141.31 2v9l 1n0q 2v9l 0.1528 0.1634 0.1884 0.0250 1.311.50 1hbz 2plz 1hbz 0.1651 0.1743 0.2026 0.0282 1.501.72 2ah2 6rxn 2pfg 0.1775 0.1851 0.2168 0.0314 1.721.97 1amk 2dya 2dya 0.1898 0.1960 0.2310 0.0346 1.972.25 2oh5 2oh5 2oh5 0.2021 0.2069 0.2452 0.0378 2.252.58 2oh7 1uvw 1uvw 0.2145 0.2178 0.2594 0.0410 2.582.95 5bna 1tre 1f4h 0.2268 0.2286 0.2736 0.0443 2.953.37 1bgj 1sv2 1ydz 0.2391 0.2395 0.2878 0.0475 3.373.86 2d3b 1gn3 2q3n 0.2515 0.2504 0.3020 0.0507 3.864.42 1aos 1veq 1veq 0.2638 0.2613 0.3162 0.0539 4.425.06 2rkj 1pgf 2rkj 0.2761 0.2721 0.3304 0.0571 5.065.80 3b5w 2b66 3b5x 0.2885 0.2830 0.3445 0.0603 5.806.63 2b9n 2b9n 3e3j 0.3008 0.2939 0.3587 0.0635 6.637.59 3c4y 3c4y 1yv0 0.3131 0.3048 0.3729 0.0668 7.598.69 2dh1 2dh1 2dh1 0.3255 0.3157 0.3871 0.0700 8.699.95 1vcr 1zbb 1vcr 0.3378 0.3265 0.4013 0.0732

Publication Year: 2009


Detection and analysis of unusual features in the structural model and structure-factor data of a birch pollen allergen.

(2012) Acta Crystallogr Sect F Struct Biol Cryst Commun 68

PubMed: 22505400 | PubMedCentral: PMC3325800 | DOI: 10.1107/S1744309112008421

Entry 3k78 , the fabricated entry 2hr0 (Janssen et al. , 2007 ▶ ), and two entries that are now updated ( 1n0q and 1n0r ) but contained erroneously deposited calculated structure factors (Mosa... i et al. , 2002 ▶ ), could be clearly identified as outliers given the distribution in Fig. 7 ▶ .

Successful redeposition of the correct observed structure factors of entries 1n0q and 1n0r (Mosavi et al. , 2002 ▶ ), reprocessed form original diffraction images collected a decade ago, clearly demonstrates the value of proper image data archiving.

Publication Year: 2012