Primary Citation PubMed: 9342319
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Functional significance of the hemadsorption activity of influenza virus neuraminidase and its alteration in pandemic viruses.
(2009) Arch Virol 154
PubMed: 19458903 | PubMedCentral: PMC2691527 | DOI: 10.1007/s00705-009-0393-x
a Molecular surface of N9 NA tetramer with sialic acids bound to the catalytic ( green ) and hemadsorption ( yellow ) sites (1MWE, [ 48 ]).
Publication Year: 2009
Combining docking with pharmacophore filtering for improved virtual screening.
(2009) J Cheminform 1
PubMed: 20298524 | PubMedCentral: PMC3152774 | DOI: 10.1186/1758-2946-1-6
Based on this study's conclusions, we chose the 1MWE crystal structure [ 16 ], which has good (1.7 Å) resolution and could accommodate all members of a set of co-crystallized ligands [ 15 ].
To develop these filters we first reproduced the docking of a set of 21 co-crystallized ligands back into the 1MWE crystal structure, as was done by Birch et al. in their analysis [ 15 ].
Crystal structure of a new benzoic acid inhibitor of influenza neuraminidase bound with a new tilt induced by overpacking subsite C6.
(2012) BMC Struct Biol 12
PubMed: 22559154 | PubMedCentral: PMC3416664 | DOI: 10.1186/1472-6807-12-7
Comparative analysis The model of 2 complexed with N9 NA was compared to sialic acid complexes with A/Tokyo/3/1967 N2 NA, PDB ID: 2BAT [ 35 ] and A/tern/Australia/G70c/75 N9 NA, PDB ID... 1MWE [ 26 ].
Inhibitor 2 did not bind to the second sialic acid binding site observed in the structure of N9 complexed with sialic acid at low temperature [ 26 ] (PDB ID, 1MWE) or at room temperature (PDB ID, 2CML).
Publication Year: 2012
Parallel screening of wild-type and drug-resistant targets for anti-resistance neuraminidase inhibitors.
(2013) PLoS One 8
PubMed: 23437217 | PubMedCentral: PMC3577712 | DOI: 10.1371/journal.pone.0056704
The electrostatic interactions between negatively-charged moieties and positively-charged residues are consistent with NA complexed with known ligands including sialic acid, zanamivir, and GS4071 (PDB... codes 3B7E  , 2HU4  , and 1MWE  ).
The crystal structures of protein-compound complexes (PDB codes 3B7E  , 2HU4  , and 1MWE  ) indicate that the acetamido moieties of sialic acid, zanamivir, and GS4071 consistently form hydrogen bonds with R152 of the subsite.
Publication Year: 2013
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