Citations in PubMed

Primary Citation PubMed: 10329151 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 4

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Nh3D: a reference dataset of non-homologous protein structures.

(2005) BMC Struct Biol 5

PubMed: 16011803 | PubMedCentral: PMC1182382 | DOI: 10.1186/1472-6807-5-12

For example, our "immunoglobulin-like" topology representative is the human copper, zinc superoxide dismutase, 1MFM:A:1-153, however the metal-binding greek-key proteins and the immunoglobulin superfa... ily, both of which are included in this class, may indeed be examples of convergent evolution towards a common fold.

Publication Year: 2005


Adherent monomer-misfolded SOD1.

(2008) PLoS One 3

PubMed: 18946506 | PubMedCentral: PMC2567031 | DOI: 10.1371/journal.pone.0003497

Simulation models of the FLAG-tagged SOD1s were constituted using Discovery Studio 1.7 software (Accelrys, USA) from Protein Data Bank (PDB) data; 1MFM for DF, 2V0A for WF as templates.

Publication Year: 2008


Systematic comparison of crystal and NMR protein structures deposited in the protein data bank.

(2010) Open Biochem J 4

PubMed: 21293729 | PubMedCentral: PMC3032220 | DOI: 10.2174/1874091X01004010083

NMR X-ray PDB entry Chain Number of models PDB entry Chain Resolution (Å) 1 2JQX A 1 1D8C A 2.00 2 1EZO A 10 1ANF A 1.67 3 1AH2 A 18 1IAV A 1.80 4 1TR4 A 20 1UOH A 2.00 5 1BXL A 1 1MAZ A 2.20 ... 2GPQ A 10 1IPB A 2.00 7 1A23 A 1 1A2J A 2.00 8 1MM4 A 20 1THQ A 1.90 9 1GGR A 3 2F3G B 2.13 10 1CRP A 20 1GNP A 2.70 11 1OCA A 20 1W8L A 1.80 12 1NMV A 10 1PIN A 1.35 13 1AX3 A 16 1GPR A 1.90 14 1DF3 A 10 1JV4 A 1.75 15 1B6F A 23 1BV1 A 2.00 16 1EQ0 A 20 1DY3 A 2.00 17 1BVH A 15 1DG9 A 1.90 18 1RCH A 8 1RDD A 2.80 19 6I1B A 1 1I1B A 2.00 20 1BA9 A 36 1MFM A 1.02 21 1XPW A 20 1TVG A 1.60 22 1FXT A 1 1FZY B 1.90 23 1JOK A 1 1SNO A 1.70 24 1CFC A 25 1A29 A 2.74 25 1ORM A 20 1QJ8 A 1.90 26 1PFL A 20 1FIK A 2.30 27 1BLR A 22 1CBQ A 2.20 28 2P3M A 20 2VBS A 3.00 29 1JJJ A 20 1B56 A 2.05 30 1JBH A 20 1CRB A 2.10 31 1TBD A 1 2FUF A 1.45 32 1AEL A 20 1ICM A 1.50 33 1A63 A 10 1A62 A 1.55 34 1IY3 A 1 1IWT A 1.40 35 1CYL A 20 1HIK A 2.60 36 1CEY A 46 1CHN A 1.76 37 2JU3 A 10 1LFO A 2.30 38 1FR0 A 30 1A0B A 2.06 39 1GIO A 10 1AGI A 1.50 40 2PRF A 19 1PRQ A 2.50 41 1MVG A 10 1TVQ A 2.00 42 2AAS A 32 1AQP A 2.00 43 1FSP A 20 1NAT A 2.45 44 1PIR A 1 1P2P A 2.60 45 1IT4 A 1 1FAZ A 1.40 46 1KLV A 20 1GNU A 1.75 47 2JN8 A 20 2ES9 A 2.00 48 1SVQ A 20 1SVY A 1.75 49 1K19 A 20 1KX8 A 2.80 50 1BC4 A 15 1KM8 A 1.90 51 1BNR A 20 1YVS A 2.20 52 1A67 A 16 1CEW I 2.00 53 2NLN A 20 1OMD A 1.85 54 1F40 A 10 1FKB A 1.70 55 1MPH A 50 1BTN A 2.00 56 1N5H A 15 1PFP A 2.30 57 1IYY A 24 1BU4 A 1.90 58 2CZN A 38 2CWR A 1.70 59 1N7T A 20 2H3L B 1.00 60 2EVN A 20 2IL4 A 2.05 61 1GO0 A 10 1H7M A 1.96 62 1M42 A 1 2C9Q A 1.60 63 1IIY A 1 3EZM A 1.50 64 1JNJ A 20 1LDS A 1.80 65 1BEG A 18 1BEO A 2.20 66 1C15 A 16 1CY5 A 1.30 67 1BMW A 38 1WHO A 1.90 68 2JMV A 20 2QSK A 1.00 69 1AFH A 15 1FK0 A 1.80 70 3HSF A 30 2HTS A 1.83 71 1PQX A 10 2FFM A 2.51 72 1L8Y A 30 2HDZ A 2.00 73 2CKU A 15 2CG6 A 1.55 74 1A2S A 1 1CTJ A 1.10 75 1ACA A 20 1HB6 A 2.00 76 1GGR B 3 1POH A 2.00 77 1ACP A 2 1T8K A 1.10 78 1D3Z A 10 1AAR B 2.30 79 1RQS A 20 1CTF A 1.70 80 2AIT A 9 1HOE A 2.00 81 1FD8 A 1 1CC7 A 1.20 82 1K3G A 30 1C75 A 0.97 83 2ORC A 32 1ORC A 1.54 84 1HFG A 1 2FHT A 1.70 85 1ZUG A 20 2CRO A 2.35 86 1BQT A 6 1GZR B 2.0 87 3MEF A 16 1MJC A 2.00 88 2BTT A 20 1RUW A 1.80 89 1QQV A 1 1YU5 X 1.40 90 1LQH A 1 2ASC A 1.10 91 1IJC A 20 1F94 A 0.97 92 1AEY A 15 1SHG A 1.80 93 1ERA A 1 3EBX A 1.40 94 1ROF A 10 1VJW A 1.75 95 1JV8 A 23 1BPI A 1.09 96 1H0T B 40 1LP1 A 2.30 97 1KUN A 20 1KNT A 1.60 98 1GB1 A 60 1PGA A 2.07 99 1BFY A 20 1FHH A 1.50 100 1MBE A 1 1GUU A 1.60 101 1FDM 20 2C0W A 3.20 102 1CCM A 8 1CBN A 0.83 103 1PJF A 27 1QL1 A 3.10 104 1HEV A 6 1Q9B A 1.50 105 1ERC A 20 2ERL A 1.00 106 1KX6 A 20 1GCN A 3.00 107 1CIR B 20 1CIQ B 2.20 108 1V6R A 20 1EDN A 2.18 109 1XGA A 35 1NOT A 1.20 Table 2 Mean RMDS and RMDS 100 Values (Standard Deviations in Parenthesis) Calculated for the Superposed Equivalent X-Ray Protein Structure and NMR Models.

Publication Year: 2010


Structural switching of Cu,Zn-superoxide dismutases at loop VI: insights from the crystal structure of 2-mercaptoethanol-modified enzyme.

(2012) Biosci Rep 32

PubMed: 22804629 | PubMedCentral: PMC3497728 | DOI: 10.1042/BSR20120029

Another interesting finding is that all loop VI structures of the monomeric SOD1 mutants (PDB: 1MFM, 2XJK, 2XJL and 3HFF) are F-type (Supplementary Table S2).

Publication Year: 2012