Primary Citation PubMed: 11732897
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Synthesis of phenylazonaphtol-?-D-O-glycosides, evaluation as substrates for beta-glycosidase activity and molecular studies.
(2014) Org Med Chem Lett 4
PubMed: 24995152 | PubMedCentral: PMC4074863 | DOI: 10.1186/2191-2858-4-2
The protein assigned for the docking analysis was E. coli β-galactosidase (PDB IDs: 1JYN), and the residues chosen were Asn102, Asp201, Asn460, His418, Glu461, Glu537, His540, Phe 601, and Trp... 99 which have been described to participate in the interactions with its natural substrate lactose [ 16 ].
Publication Year: 2014
Unravelling the multiple functions of the architecturally intricate Streptococcus pneumoniae ?-galactosidase, BgaA.
(2014) PLoS Pathog 10
PubMed: 25210925 | PubMedCentral: PMC4161441 | DOI: 10.1371/journal.ppat.1004364
(D) Overlap of the BgaA active site (purple stick representation for side chains, green sticks for LacNAc, and red spheres for waters) with the active site of E. coli LacZ in complex with lactose (tan... stick representation for side chains, orange sticks for lactose, and blue spheres for waters, green sphere for Mg 2+ , and purple sphere for Na + ; PDB ID 1JYN).
PubMed ID is not available.
Published in 2015
coli has been clearly elucidated with so many crystallographic structures such as PDB 1DP0, 1JYN and 1JYV.
Publication Year: 2015
Computational Analysis The experimental structures of β-galactosidase from E. coli in complex with a lactose moiety (PBD ID: 1JYN) or a galactose moiety (PDB ID: 1JZ7, resolution 1.5 Å... [ 8 ] were used as model for Figure 1 and for the docking simulations, respectively.
Figure 1 Experimental crystallography structure of the β-galactosidase lacZ of E. coli (Protein Data Bank code: 1JYN, chain A, surface, purple) ( A ) in complex with a lactose moiety (spheres, cyan) in the active site using PyMOL software; ( B ) Visualization of the interactions between the lactose moiety and the β-galactosidase enzyme with PoseView webserver.
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