Primary Citation PubMed: 9568891
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Curation of viral genomes: challenges, applications and the way forward.
(2006) BMC Bioinformatics 7 Suppl 5
PubMed: 17254296 | PubMedCentral: PMC1764468 | DOI: 10.1186/1471-2105-7-S5-S12
Two models of NS3 serine protease of JEV were built using the crystal structures of NS3 of Dengue virus II (DEN) PDB_ID: 1BEF [ 74 ] and Hepatitis C Virus (HCV) PDB_ID: 1JXP [ 75 ].
Publication Year: 2006
Allosteric inhibitors of the NS3 protease from the hepatitis C virus.
(2013) PLoS One 8
PubMed: 23936097 | PubMedCentral: PMC3728351 | DOI: 10.1371/journal.pone.0069773
Crystallographic structure of the protease domain (N-terminal domain of NS3 protein) from the hepatitis C virus (PDB code: 1JXP).
Publication Year: 2013
NS3 protease from hepatitis C virus: biophysical studies on an intrinsically disordered protein domain.
(2013) Int J Mol Sci 14
PubMed: 23803659 | PubMedCentral: PMC3742187 | DOI: 10.3390/ijms140713282
The zinc-coordinating residues and the catalytic residues are shown as dark cyan sticks; ( C ) NS3 protease domain in the presence of a NS4A cofactor-mimicking peptide (blue sticks) (PDB code: 1JXP) [... 28 ].
New binding site conformations of the dengue virus NS3 protease accessed by molecular dynamics simulation.
PubMed: 23991109 | PubMedCentral: PMC3749139 | DOI: 10.1371/journal.pone.0072402
However, as it was built based on the more distantly related hepatitis C virus NS3/NS4A protease (PDB id 1JXP [ 62 ]), several structural differences (Cα RMSD of 11 Å) were observed wh... n comparing it to the recently resolved DENV-3 NS2B/NS3 protease (PDB id 3U1I [ 35 ]).
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