Citations in PubMed

Primary Citation PubMed: 12962487 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 2

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

  • 3 per page
  • 5 per page
  • 10 per page
  • view all
  • Publication Year
  • Ascending
  • Descending

Enumerating pathways of proton abstraction based on a spatial and electrostatic analysis of residues in the catalytic site.

(2012) PLoS One 7

PubMed: 22745790 | PubMedCentral: PMC3379984 | DOI: 10.1371/journal.pone.0039577

PDB ids Paths for proton transfer β-lactamases 1E25,1M40,3JYI,2G2U 1) [Ser70OG->Glu166OE1] 2) [Lys73NZ->Glu166OE1, Ser70OG->Lys73NZ] 2P74 1) [Ser70OG->Asn170ND2... 2) [Ser70OG->Glu166OE1] 3) [Ser130OG->Lys73NZ, Lys73NZ->Glu166OE1 , Ser72OG->Lys73NZ, Ser70OG->Ser72OG] 4) [Ser130OG->Lys73NZ, Ser237OG->Asn170ND2, Thr235OG1->Lys234NZ, Ser72OG->Glu166OE1, Ser70OG->Ser72OG] 5) [Ser70OG->Asn132ND2] 6) [Ser130OG->Lys73NZ, Ser237OG->Asn170ND2, Ser70OG->Ser237OG] 7) [Ser130OG->Lys73NZ, Lys73NZ->Glu166OE1, Ser70OG->Lys73NZ] 1IYS 1) [LYS73NZ->ASN170ND2, SER70OG->LYS73NZ] Serine proteases 1A0J 1) [Ser195OG->His57NE2] 1GCI 1) [Ser221OG->His64NE2] Serine hydroxymethyltransferase 1CJ0 1) [Lys229NZ->His126ND1, Thr226OG1->Lys229NZ] 2) [Thr226OG1->His228ND1] We now consider 2 CTX-M type enzymes – PDBid:2P74 [7] and PDBid:1IYS [32] – in which the Lys73 has more flexibility than other classes of Class A β -lactamases.

ab ac ad ae bc bd be cd ce de PDB 1E25 2.8 3.2 4.7 5.5 3.6 5.6 5 2.9 8 10 1M40 2.7 3 4.6 5.4 3.1 5.2 5 2.8 7.7 9.8 3JYI 3.1 2.9 4.6 5 3.9 5.8 4.4 2.8 7.2 9.4 2G2U 2.8 3.5 4.4 5.4 4.3 5.3 5.1 2.6 8.4 9.6 CTX BLases 2P74 2.7 3.1 4.5 3.9 4.3 5.7 2.9 2.8 6.6 8.1 1IYS 2.9 2.8 4.2 4.1 2.7 4.7 4.3 2.9 6.3 7.9 10.1371/journal.pone.0039577.

Publication Year: 2012


Biochemical characterization of CTX-M-15 from Enterobacter cloacae and designing a novel non-?-lactam-?-lactamase inhibitor.

(2013) PLoS One 8

PubMed: 23437273 | PubMedCentral: PMC3578935 | DOI: 10.1371/journal.pone.0056926

Three dimensional structure of this protein was built by using the template (pdb:1IYS), having 86% identity.

Publication Year: 2013