Primary Citation PubMed: 11340196
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Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM.
(2010) Nucleic Acids Res 38
PubMed: 19952067 | PubMedCentral: PMC2831300 | DOI: 10.1093/nar/gkp1057
Another distinction between the two models is in the source of the X-ray structures used for the refinement: Gao et al. , 2003 ( 67 ) combined the 50S structure from H.m. (PDB code 1ffk) with the 30S ... tructure from T.t. (PDB code 1ibl), while Gao et al. , 2009 ( 66 ) used the recent (2005) 70S X-ray structure from E.c. [PDB code: 30S: 2avy/50S: 2aw4 ( 23 )].
Publication Year: 2010
Domain metastability: a molecular basis for immunoglobulin deposition?
(2010) J Mol Biol 399
PubMed: 20394753 | PubMedCentral: PMC2954335 | DOI: 10.1016/j.jmb.2010.04.011
At the bottom we show single domains of each structure superimposed: the structure reported here in lilac, the 1DQT in red, 1IBL in blue, 1I85 in green, 1BX7 in magenta.
A structural basis for streptomycin-induced misreading of the genetic code.
(2013) Nat Commun 4
PubMed: 23322043 | PubMedCentral: PMC3552334 | DOI: 10.1038/ncomms2346
The root-mean-square deviation (rmsd) between all 16S rRNA phosphate atoms of our apo 30S structure and the equivalent PDB entry 1J5E 12 is 0.79 Å, and the rmsd between our MAP structure and P... B entry 1IBL 9 is 0.48 Å ( Supplementary Fig.
In comparison, the rmsds between open and closed 30S structures are 1.2 Å between the Apo and MAP data sets and 0.97 Å between the analogous PDB entries 1J5E and 1IBL 9 , 12 , 13 .
Publication Year: 2013
PubMed ID is not available.
Published in 2015
( A ) Crystal structure of the 30S ribosome (PDB: 1IBL) ( 15 ).
Publication Year: 2015
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