Citations in PubMed

Primary Citation PubMed: 15299531 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 2

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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SPROUTS: a database for the evaluation of protein stability upon point mutation.

(2009) Nucleic Acids Res 37

PubMed: 18945702 | PubMedCentral: PMC2686433 | DOI: 10.1093/nar/gkn704

The example of a ribonuclease from Streptomyces aureofaciens (PDB code: 1gmp) illustrates this case.

Positions of minima of stability score for DFIRE and I-Mutant, MIR prediction, TEF assignment and solvent accessibility for the ribonuclease from S. aureofaciens (PDB code: 1gmp) Position and related information DFIRE 7 20 28 37 44 52 56 71 81 86 92 I-Mutant 7 11 22 27 35 44 52 56 60 71 82 93 Consensus 7 11 21 27.5 36 44 52 56 60 – 71 81.5 86 92.5 92.5 – MIR 8 22 36 57 58 70 71 86 91 92 96 Delta pos.

Query interface of SPROUTS with 1gmp as selected structure and default options.

The lower window contains a view of the 1gmp structure with the Jmol applet.

The lower window in Figure 2 shows an example of the 3D applet with the 1gmp structure.

The query process consists in selecting the 1gmp structure in the PDB code field and using the default options as illustrated in Figure 1 .

Publication Year: 2009


Sequence and structural analysis of the Asp-box motif and Asp-box beta-propellers; a widespread propeller-type characteristic of the Vps10 domain family and several glycoside hydrolase families.

(2009) BMC Struct Biol 9

PubMed: 19594936 | PubMedCentral: PMC2716378 | DOI: 10.1186/1472-6807-9-46

C. RNase Sa in complex with GMP ( 1gmp ).

Publication Year: 2009