Citations in PubMed

Primary Citation PubMed: 11889032 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 4

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Hierarchical structure controls nanomechanical properties of vimentin intermediate filaments.

(2009) PLoS One 4

PubMed: 19806221 | PubMedCentral: PMC2752800 | DOI: 10.1371/journal.pone.0007294

So far, only parts of two of the four segments, a section of the 1A and 2B domain of the vimentin dimer structure, have been crystallized and their atomic structure identified based on x-ray diffracti... n experiments [14] , [15] , [16] , [17] (the structures are found in Protein Data Bank (PDB) entries 1gk4, 1gk6 and 1gk7).

Furthermore, we compare the radial distribution function of our model with the existing segments obtained from x-ray diffraction (PDB entries 1gk7 for the 1A segment and 1gk4 for the 2B segment), showing good agreement as depicted in Fig.

Publication Year: 2009


Whole-exome sequencing to identify a novel LMNA gene mutation associated with inherited cardiac conduction disease.

(2013) PLoS One 8

PubMed: 24349489 | PubMedCentral: PMC3861486 | DOI: 10.1371/journal.pone.0083322

LMNA wild-type/mutation Structural Modeling Homology detection and structural prediction by HMM-HMM comparison (HHpred) [ 18 ] was employed to build the structural models of wild-type (WT) and Gly232V... l lamin A/C ( LMNA ) based on the crystal structures of intermediate filaments (tropomyosin from Sus scrofa , PDB ID: 1C1G [ 19 ]; human lamin coil 2B, PDB ID: 1X8Y [ 20 ]; human vimentin coil 2B fragment, PDB ID: 1GK4 [ 21 ] and human vimentin coil 2 fragment, PDB ID: 3TRT [ 22 ]).

To accomplish this, we utilized HHpred to search for the structures with the highest sequence identity across this region: tropomyosin from Sus scrofa (PDB ID: 1C1G) [ 19 ], human lamin coil 2B (PDB ID: 1X8Y) [ 20 ], human vimentin coil 2B fragment (PDB ID: 1GK4) [ 21 ] and human vimentin coil 2 fragment (PDB ID: 3TRT) [ 22 ].

Publication Year: 2013


Two desmin gene mutations associated with myofibrillar myopathies in Polish families.

(2014) PLoS One 9

PubMed: 25541946 | PubMedCentral: PMC4277352 | DOI: 10.1371/journal.pone.0115470

Molecular modelling The structure of desmin dimer (residues 333–411) was built using homology modelling tools (Swiss-Model server) [19] based on the structure of human vimentin coiled-coil 2B ... imeric fragment (residues 328–406) deposited in the Protein Data Bank (id: 1GK4) [20] .

Publication Year: 2014


PubMed ID is not available.

Published in 2015

PubMedCentral: PMC4504709

pdb [ 35 ] and 1GK4.

Publication Year: 2015