Primary Citation PubMed: 11469861
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Structural basis of the Methanothermobacter thermautotrophicus MCM helicase activity.
(2006) Nucleic Acids Res 34
PubMed: 17062628 | PubMedCentral: PMC1635305 | DOI: 10.1093/nar/gkl708
The BchI subunit of Mg-chelatase from Rhodobacter capsulatus ( 9 ) (PDB accession code: 1G8P) was also used, after superimposing six copies of the monomer onto the ZraR hexamer.
Publication Year: 2006
On the origin of the histone fold.
(2007) BMC Struct Biol 7
PubMed: 17391511 | PubMedCentral: PMC1847821 | DOI: 10.1186/1472-6807-7-17
OF ALIGNED RESIDUES RMSD TO HMFA [Å] 1B67 A+B HmfA Methanothermus fervidus Histone Archaeal 124/124 0.00 1TAF A+B TAFII42/62 Drosophila melanogaster Histone TBP-associated factors 124/132 1.19... 1TZY A+B H2A/H2B Gallus gallus Histone Nucleosome core 118/129 1.33 1TZY C+D H3/H4 Gallus gallus Histone Nucleosome core 114/134 1.10 1IN4 A RuvB Thermotoga maritima C-domain AAA+: helicases 46/71 1.38 1R6B A ClpA-D1 Escherichia coli C-domain AAA+: Clp-D1 52/86 1.70 1LV7 A FtsH Escherichia coli C-domain AAA+: AAA 45/71 1.21 1NY5 A NtrC Aquifex aeolicus C-domain AAA+: σ 54 52/72 1.57 1G8P A Mg chelatase Rhodobacter capsulatus C-domain AAA+ a) 12/16(α 1) b) 47/54(α 2–4) a) 0.59 b) 1.38 1K6K A ClpA-N (1 st half) Escherichia coli Clp N-domain ClpA 33/78 1.54 1K6K A ClpA-N (2 nd half) Escherichia coli Clp N-domain ClpA 33/62 1.40 1KHY A ClpB-N (1 st half) Escherichia coli Clp N-domain ClpB 33/80 1.13 1KHY A ClpB-N (2 nd half) Escherichia coli Clp N-domain ClpB 33/58 0.96
Publication Year: 2007
The AAA+ superfamily of functionally diverse proteins.
(2008) Genome Biol 9
PubMed: 18466635 | PubMedCentral: PMC2643927 | DOI: 10.1186/gb-2008-9-4-216
The BchI AAA+ module from Rhodobacter capsulatus Mg 2+ chelatase (left, PDB 1G8P ) belongs to the helix-2 insert clade.
Publication Year: 2008
Mutational analysis of Cvab, an ABC transporter involved in the secretion of active colicin V.
(2012) PLoS One 7
PubMed: 22539970 | PubMedCentral: PMC3335142 | DOI: 10.1371/journal.pone.0035382
Coordinates of the crystal structures of the E. coli translation inhibitor (PDB: 1JD1) and photosynthesis metal transporter (PDB: 1G8P) were obtained from protein database ( www.rcsb.org/pdb ) and use... as templates for the molecular modeling.
Coordinates of the crystal structures of the E.coli translation inhibitor (PDB: 1JD1) and photosynthesis metal transporter (PDB: 1G8P) were obtained from protein database ( www.rcsb.org/pdb ) and used as homolog templates for the molecular modeling.
Amino acid residues 1 through 87 are based on template 1G8P, and residues 88 through 125 are based on template 1JD1.
Publication Year: 2012
The CoxD protein, a novel AAA+ ATPase involved in metal cluster assembly: hydrolysis of nucleotide-triphosphates and oligomerization.
PubMed: 23077613 | PubMedCentral: PMC3471820 | DOI: 10.1371/journal.pone.0047424
The 3D structure of CoxD was modeled with the 3D structure of BchI (1G8P) from Rhodobacter capsulatus  as a template.
The 3D structure of CoxD was modeled with the automated web surfer ESyPred3D employing the CoxD* sequence shown and the 3D structure of BchI (1G8P)  from Rhodobacter capsulatus as template.
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