Citations in PubMed

Primary Citation PubMed: 11170214 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 3

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Visualization of early events in acetic acid denaturation of HIV-1 protease: a molecular dynamics study.

(2011) PLoS One 6

PubMed: 21738569 | PubMedCentral: PMC3126794 | DOI: 10.1371/journal.pone.0019830

[32] (PDB ID 1G6L) and the solution structure of PR monomer reported by Ishima et al.

Publication Year: 2011


Computable features required to evaluate the efficacy of drugs and a universal algorithm to find optimally effective drug in a drug complex.

(2012) PLoS One 7

PubMed: 22457784 | PubMedCentral: PMC3311648 | DOI: 10.1371/journal.pone.0033709

In fact, selecting 1rd8, 2hu4, 1nyj, 3cm8, 3hw3, 1g6l, 2jle, 2gv9, 3gbn, 3gbm, 3fku, 3sdy, 3ztn and 3ztj as the target proteins, and choosing Amantadine, Aspirin, Azithromycin, HEM, Heroin, Isosorbide... Oseltamivir, Zanamivir and Vancomycin as the panel of drugs, then all of these ligands are predicted to be docked with the same pocket on each of above target proteins if these ligands can be packed into this pocket, while all of those ligands will arrive at the minimal value of minimal free energy at a neighborhood of the pocket if those ligands can not be packed into this pocket.

Publication Year: 2012


Mining the protein data bank to differentiate error from structural variation in clustered static structures: an examination of HIV protease.

(2012) Viruses 4

PubMed: 22590675 | PubMedCentral: PMC3347031 | DOI: 10.3390/v4030348

Several exhibited the closed flap conformation, though closer examination revealed these to belong to covalently-bonded PR dimers (PDB IDs 1g6l and 1lv1) that were split into monomers by removing the ... ridge of connecting residues.

Publication Year: 2012