Citations in PubMed

Primary Citation PubMed: 2329585 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 4

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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ResBoost: characterizing and predicting catalytic residues in enzymes.

(2009) BMC Bioinformatics 10

PubMed: 19558703 | PubMedCentral: PMC2713229 | DOI: 10.1186/1471-2105-10-197

In summary, the PDB ID's for the proteins (and their included chain) are: 1qdl-A , 1b8g-B , 1fps , 1mfp-A , 1arz-A , 1d3g-A , 1qb4-A , 1kas , 1a7u-A , 1dii-A , 1grc-A , 1uag , 1zio , 1ay4-A , 1bou-B ,... 1b73-A , 1q91-A , 1daa-A , 1cd5-A , 1aq0-A , 1fdy-A , 1ecx-A , 1qba , 1kc7-A , 1pja-A , 1hdh-A , 1geq-B , 1exp , 1aql-A , 1b66-A , 1qum-A , 1d7r-A , 1qd6-C , 1cz1-A , 5enl , 1ah7 , 1pmi , 1og1-A , 1tph-1 , 1ey2-A , 1ahj-A , 1pnl-B , 1ir3-A , 1oe8-B , 1d0s-A , 1gim , 1std , 1a0i , 1aop , 1qcn-B , 1get-B , 1uqt-A , 1m6k-A , 1trk-A , 1sme-A , 2ts1 , 1ps9-A , 1ecl , 1ef0-A , 1aj0 , 2dhn , 1akd , 7odc-A , 135l , 1fcb-A , 1cbg , 1f8m-A , 1aj8-A , 1cel-A , 1l8t-A , 1jms-A , 1mrq-A , 1qh9-A , 1mlv-B , 1mhl-D , 1f75-A , 1d6o-A , 1b57-A , 1chd , 1bwz-A , 1nln-A , 1nba-A , 1cmx-A , 1xik-B , 1lnh , 1opm-A , 1lxa , 1a50-B , 1yve-L , 1d2r-A , 1bt1-A , 1ab8-A , 1dbt-A , 1amo-A , 1p4r-A , 1eyp-A , 1do8-A , 1oyg-A , 1rbn , and 1qmh-B .

Publication Year: 2009


Composite structural motifs of binding sites for delineating biological functions of proteins.

(2012) PLoS One 7

PubMed: 22347478 | PubMedCentral: PMC3275580 | DOI: 10.1371/journal.pone.0031437

Cytochrome and glycolate oxidase (GOX) Mitochondrial cytochrome , also known as L-lactate dehydrogenase, from Saccharomyces cerevisiae (PDB 1FCB [56] , chain A, EC 1.1.2.3) and glycolate oxidase (GOX)... from spinach (PDB 1AL7 [57] , chain A, EC 1.1.3.15) share the TIM-barrel fold with 40% sequence identity, and have the same elementary motif for flavin mononucleotide (FMN) ( Fig. 4D ).

Publication Year: 2012


Rationally re-designed mutation of NAD-independent L-lactate dehydrogenase: high optical resolution of racemic mandelic acid by the engineered Escherichia coli.

(2012) Microb Cell Fact 11

PubMed: 23176608 | PubMedCentral: PMC3526519 | DOI: 10.1186/1475-2859-11-151

The X-ray crystal structure of flavocytochrome b 2 has been resolved (PDB ID code 1FCB), and the active site for 2-α-hydroxyacid dehydrogenation has been identified [ 23 ].

The figure is generated according to the molecular structure of flavocytochrome b 2 at 2.4 Å resolution (PDB code 1FCB) [ 23 ] with PyMOL (The PyMOL Molecular Graphics System, Version 0.99rc6, Schrödinger, LLC).

Publication Year: 2012


A rule-based algorithm for automatic bond type perception.

(2012) J Cheminform 4

PubMed: 23113939 | PubMedCentral: PMC3557220 | DOI: 10.1186/1758-2946-4-26

The first data set collected by Ricketts et al. [ 15 ] has 17 ligands extracted from the PDB files (PDB entries are 1cla, 1fcb, 1fx1, 1gox, 2aat, 2dhf, 2gbp, 2trm, 3cpp, 3ptb, 4dfr, 4xia, 5xia, 7dfr, ... atc, and 8rsa), and it has been extensively used for testing the algorithms of bond assignment.

Publication Year: 2012