Primary Citation PubMed: 10986125
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Structure-based analysis of A19D, a variant of transthyretin involved in familial amyloid cardiomyopathy.
(2013) PLoS One 8
PubMed: 24358189 | PubMedCentral: PMC3866121 | DOI: 10.1371/journal.pone.0082484
The structural models of A19D were generated by FoldX using a 1F41 PDB WT-TTR structure.
We initially used FoldX to create a structural model for A19D by using the crystallographic structure of the WT-TTR (PDB: 1F41).
The WT-TTR tetramer (PDB ID: 1F41 after symmetry operation) and A19D (generated by FoldX) were superimposed.
the same is true of WT-TTR (PDB: 1F41).
FoldX prediction We built three different models (A19D, V30M and T119M) by using FoldX ( http://foldx.crg.es/ ) command Buildmodel with the original WT-TTR structure as deposited in the PDB under code 1F41; each model was generated with five runs, and they converged well.
Publication Year: 2013
The importance of a gatekeeper residue on the aggregation of transthyretin: implications for transthyretin-related amyloidoses.
(2014) J Biol Chem 289
PubMed: 25086037 | PubMedCentral: PMC4192486 | DOI: 10.1074/jbc.M114.563981
On the left , the tetrameric TTR structure is displayed with the β-strands B, C, and D, comprising residues 26–57, highlighted in red (Protein Data Bank entry 1F41 ).
Publication Year: 2014
PubMed ID is not available.
Published in 2015
The X-ray model of TTR (pdb code 1F41, [ 31 ]) and X-ray data from 38.2–2.5 Å resolution were used in molecular replacement searches with the program MOLREP [ 48 ].
Publication Year: 2015
The secondary structures in the native state of TTR were obtained by judging from analysis of high resolution (<1.5 Ǻ) crystal structures of TTR (1F41.
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