Citations in PubMed

Primary Citation PubMed: 11061974 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 4

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Crystal structure of hyperthermophilic esterase EstE1 and the relationship between its dimerization and thermostability properties.

(2007) BMC Struct Biol 7

PubMed: 17625021 | PubMedCentral: PMC1936996 | DOI: 10.1186/1472-6807-7-47

EstE1 is closer in structure to HSL-family thermostable esterases AFEST (Protein Data Bank (PDB) code 1JJI ; 283 Cα atoms superimposed, root-mean-square deviation (rmsd) of 1.3 Å) and ... ST2 (PDB code 1EVQ ; 280 Cα atoms superimposed, rmsd of 1.5 Å) than to mesophilic esterases, an esterase from Alcaligenes eutrophus (PDB code 1QLW ; 196 Cα atoms superimposed, rmsd of 2.7 Å) and BFAE (PDB code 1JKM ; 282 Cα atoms superimposed, rmsd of 2.0 Å).

Publication Year: 2007


Carboxylic ester hydrolases from hyperthermophiles.

(2009) Extremophiles 13

PubMed: 19544040 | PubMedCentral: PMC2706381 | DOI: 10.1007/s00792-009-0260-4

1999 ) and EST2 from Alicyclobacillus acidocaldarius (PDB: 1EVQ) (De Simone et al.

Publication Year: 2009


Esterase LpEst1 from Lactobacillus plantarum: a novel and atypical member of the ?? hydrolase superfamily of enzymes.

(2014) PLoS One 9

PubMed: 24663330 | PubMedCentral: PMC3963902 | DOI: 10.1371/journal.pone.0092257

PDB ID Z score rmsd (Å) Identity (%) NALI a NRES b PestE 2YH2 36.0 2.1 22 289 308 AFEST 1JJI 34.6 2.5 26 290 311 EstE7 3K6K 34.4 2.4 20 285 297 EstE5 3FAK 33.9 2.5 18 286 297 EstE2 1EVQ 33.3 2... 4 25 288 308 Sto-Est 3AIK 32.4 2.2 23 269 283 Heroin esterase 1LZL 32.4 2.4 26 285 317 Brefeldin A esterase 1JKM 32.0 2.4 21 291 361 a NALI: number of aligned residues; b NRES: total number of residues.

Publication Year: 2014


PubMed ID is not available.

Published in 2015

PubMedCentral: PMC4514002

Rm EstA exhibited high structural similarity with the esterases from P. calidifontis ( Pc Est, PDB code: 3ZWQ), A. fulgidus ( Af Est, PDB code: 1JJI), Salmonella typhimurum ( St Est, PDB code: 3GA7), ... nd A. acidocaldarius ( Aa Est, PDB code: 1EVQ), with Z-score and RMSD of C α atom values of 39.7 and 1.9, 39 and 2.0, 38.8 and 2.1, and 38.2 and 2.2, respectively.

Moreover, several of them have been structurally elucidated, including Pc Est from Pyrobaculum calidifontis [Protein Data Bank (PDB) PDB: 2YH2], Af Est from Archaeoglobus fulgidus (PDB: 1JJI), St Est from Sulfolobus tokodaii (PDB: 3AIK), Aa Est from Alicyclobacillus acidocaldarius (PDB: 1EVQ), Bs Est from Bacillus subtilis (PDB: 1JKM), and EstEl (PDB: 2C7B) and EstE7 (PDB: 3DNM) from metagenomic libraries.

Rm EstB displayed high structural similarity with the esterases from P. calidifontis ( Pc Est, PDB code: 3ZWQ), A. fulgidus ( Af Est, PDB code: 1JJI), A. acidocaldarius ( Aa Est, PDB code: 1EVQ), and metagenomic library (EstE1, PDB code: 2C7B), with Z-score and RMSD of C α atom values of 41.5 and 1.8, 40.5 and 1.9, 40.3 and 2.1, and 40.3 and 1.7, respectively.

Publication Year: 2015