Citations in PubMed

Primary Citation PubMed: 11005847 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 4

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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A comprehensive analysis of 40 blind protein structure predictions.

(2002) BMC Struct Biol 2

PubMed: 12150712 | PubMedCentral: PMC122083 | DOI: null

Table 4 shows the average results of different combinations of move sets and search methods for a set of six proteins (PDB codes: 1ctf, 1e68, 1eh2, 1nkl, 1pgb, 1sro; four of these were CASP targets).

Publication Year: 2002

Scoring predictive models using a reduced representation of proteins: model and energy definition.

(2007) BMC Struct Biol 7

PubMed: 17378941 | PubMedCentral: PMC1854906 | DOI: 10.1186/1472-6807-7-15

rank native RMSD Z-score cc F.E. semfold 1ctf 1/11402 0.0 -4.7 0.13 19.7 semfold 1e68 5/11361 4.5 -2.3 0.09 21.0 semfold 1eh2 69/11442 0.3 -2.3 0.06 13.3 semfold 1khm 10/21081 11.4 -3.0 0.02 11.3 semf... ld 1nkl 4/11662 0.2 -3.5 0.09 19.4 semfold 1pgb 1/11282 0.0 -3.1 0.03 12.7 Table 10 Performance evaluation of the energy function on vhp_mcmd decoy set Decoy set PDB id.

Publication Year: 2007

The three-dimensional structure of carnocyclin A reveals that many circular bacteriocins share a common structural motif.

(2009) J Biol Chem 284

PubMed: 19692336 | PubMedCentral: PMC2781411 | DOI: 10.1074/jbc.M109.036459

The sequences were imported into DeepView Swiss-Pdb viewer ( 37 ) and were fitted onto the structure of either AS-48 (Protein Data Bank code 1E68 ) or CclA, according to the ClustalW alignment.

Publication Year: 2009

Bacillus anthracis pXO1 plasmid encodes a putative membrane-bound bacteriocin.

(2014) PeerJ 2

PubMed: 25426338 | PubMedCentral: PMC4243335 | DOI: 10.7717/peerj.679

(C) Superposition of BXA0140 (yellow) and bacteriocin AS-48 (green; PDB ID: 1E68).

Despite the difference in length, BXA0140 shows both sequence similarity (30% identical and 30% similar residues; Fig. 1C ) and structure similarity (shared helix-turn-helix motif; Fig. 2C ) with AS-48 (PDB ID: 1E68).

Publication Year: 2014