Citations in PubMed

Primary Citation PubMed: 8658133 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 5

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Amyloid oligomer conformation in a group of natively folded proteins.

(2008) PLoS One 3

PubMed: 18800165 | PubMedCentral: PMC2528939 | DOI: 10.1371/journal.pone.0003235

(D) DnaK (Hsp70) [1dkz].

(D) DnaK (Hsp70) [1dkz].

Publication Year: 2008

An interdomain sector mediating allostery in Hsp70 molecular chaperones.

(2010) Mol Syst Biol 6

PubMed: 20865007 | PubMedCentral: PMC2964120 | DOI: 10.1038/msb.2010.65

( A ) In the ADP-bound state, nucleotide-binding and substrate-binding domains tumble independently of one another, the hydrophobic interdomain linker is relatively exposed, the β-sandwich sub... domain is relatively ordered, the lid sub-domain is closed, and substrate binds with high affinity (PDB codes 1DKG and 1DKZ).

Publication Year: 2010

Modeling of the Full-Size 3D Structure of Human Chaperone Hsp70 and Study of Its Interdomain Interactions.

(2010) Acta Naturae 2

PubMed: 22649666 | PubMedCentral: PMC3347580 | DOI: null

Fig. 1 ATPase domain of human Hsp70 in complex with ADP (left; pdb ID 1HJO [ 6 ]) and the substrate-binding domain of Hsp70 prokaryotic homolog from E.coli – chaperone DnaK (right), consisting... of αSBD (yellow), βSBD (green) in complex with substrate peptide (red); pdb ID 1DKZ) [ 7 ].

RESULTS AND DISCUSSION Modeling the full-size structure of Hsp70 For the modeling, the following elements from the Protein Data Bank were used: substrate-binding domain of DnaK from Escherichia coli (1DKZ; Fig. 1 ); α-subdomain of Hsp70 substrate-binding domain from Caenorhabditis elegans (2P32 [ 19 ]); ATPase domain, βSBD and α-helix ‘A’ αSBD from bovine Hsc70 (1YUW).

To construct the αSBD the structure of the prokaryotic homolog of Hsp70, DnaK (1DKZ) was used as a template.

Publication Year: 2010

ADP ribosylation adapts an ER chaperone response to short-term fluctuations in unfolded protein load.

(2012) J Cell Biol 198

PubMed: 22869598 | PubMedCentral: PMC3413365 | DOI: 10.1083/jcb.201202005

1DKZ ; rendered in MACPyMOL).

Publication Year: 2012

Crystal structure of the stress-inducible human heat shock protein 70 substrate-binding domain in complex with peptide substrate.

(2014) PLoS One 9

PubMed: 25058147 | PubMedCentral: PMC4110032 | DOI: 10.1371/journal.pone.0103518

A. Comparison of the NRLLLTG-bound HSP70 SBD to the NRLLLTG-bound DnaK SBD (PDB code 1DKZ).

D, Structural alignment of the SBDα subdomain of the HSP70-NRLLLTG structure with the three-helix bundle region of C. elegans Hsp70 (PDB code 2P32, cyan) and DnaK (PDB code 1DKZ, blue).

Publication Year: 2014