Primary Citation PubMed: 8658133
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Amyloid oligomer conformation in a group of natively folded proteins.
(2008) PLoS One 3
PubMed: 18800165 | PubMedCentral: PMC2528939 | DOI: 10.1371/journal.pone.0003235
(D) DnaK (Hsp70) [1dkz].
Publication Year: 2008
An interdomain sector mediating allostery in Hsp70 molecular chaperones.
(2010) Mol Syst Biol 6
PubMed: 20865007 | PubMedCentral: PMC2964120 | DOI: 10.1038/msb.2010.65
( A ) In the ADP-bound state, nucleotide-binding and substrate-binding domains tumble independently of one another, the hydrophobic interdomain linker is relatively exposed, the β-sandwich sub... domain is relatively ordered, the lid sub-domain is closed, and substrate binds with high affinity (PDB codes 1DKG and 1DKZ).
Publication Year: 2010
Modeling of the Full-Size 3D Structure of Human Chaperone Hsp70 and Study of Its Interdomain Interactions.
(2010) Acta Naturae 2
PubMed: 22649666 | PubMedCentral: PMC3347580 | DOI: null
Fig. 1 ATPase domain of human Hsp70 in complex with ADP (left; pdb ID 1HJO [ 6 ]) and the substrate-binding domain of Hsp70 prokaryotic homolog from E.coli – chaperone DnaK (right), consisting... of αSBD (yellow), βSBD (green) in complex with substrate peptide (red); pdb ID 1DKZ) [ 7 ].
RESULTS AND DISCUSSION Modeling the full-size structure of Hsp70 For the modeling, the following elements from the Protein Data Bank were used: substrate-binding domain of DnaK from Escherichia coli (1DKZ; Fig. 1 ); α-subdomain of Hsp70 substrate-binding domain from Caenorhabditis elegans (2P32 [ 19 ]); ATPase domain, βSBD and α-helix ‘A’ αSBD from bovine Hsc70 (1YUW).
To construct the αSBD the structure of the prokaryotic homolog of Hsp70, DnaK (1DKZ) was used as a template.
ADP ribosylation adapts an ER chaperone response to short-term fluctuations in unfolded protein load.
(2012) J Cell Biol 198
PubMed: 22869598 | PubMedCentral: PMC3413365 | DOI: 10.1083/jcb.201202005
1DKZ ; rendered in MACPyMOL).
Publication Year: 2012
Crystal structure of the stress-inducible human heat shock protein 70 substrate-binding domain in complex with peptide substrate.
(2014) PLoS One 9
PubMed: 25058147 | PubMedCentral: PMC4110032 | DOI: 10.1371/journal.pone.0103518
A. Comparison of the NRLLLTG-bound HSP70 SBD to the NRLLLTG-bound DnaK SBD (PDB code 1DKZ).
D, Structural alignment of the SBDα subdomain of the HSP70-NRLLLTG structure with the three-helix bundle region of C. elegans Hsp70 (PDB code 2P32, cyan) and DnaK (PDB code 1DKZ, blue).
Publication Year: 2014
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