Citations in PubMed

Primary Citation PubMed: 10649999 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 3

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabets.

(2007) BMC Bioinformatics 8

PubMed: 17662112 | PubMedCentral: PMC2034607 | DOI: 10.1186/1471-2105-8-270

Blind heterodimer set a TS1, TS2 sets b PDB ID 20Cl Bastolla 6Cl PDB ID 20Cl Bastolla 6Cl 1ai7 1 1 1 1abr 4 2 3 1as4 1 1 1 1aui 1 1 1 1bpl 1 1 1 1ay7 3 3 2 1clv 2 1 2 1blx 3 6 3 1dj7 4 4 4 1c1y 3 4 3 ... dow 1 1 1 1dkf 2 47 1 1eud 8 9 7 1ugh 1 3 1 1f0c 1 1 1 1efv 1 1 1 1ksg 5 3 5 1ezq 1 1 1 1ku6 3 2 4 1f3v 67 145 36 1lot 1 1 1 1fle 19 4 9 1lpb 20 8 16 1hdm 1 1 1 1mhm 1 1 1 1itb 1 1 3 1mtp 1 1 1 1phn 1 1 1 1mzw 3 3 4 1qav 1 2 1 1npe 4 4 2 1smp 14 69 2 1nw9 1 10 1 1stf 2 5 1 1n52 10 1 9 D c 8/17 6/17 9/17 1o5m 3 1 2 D 3 13/17 9/17 15/17 1qge 1 1 1 1rke 1 1 1 1rtj 1 2 1 1ubt 1 2 1 4sgb 5 6 5 D c 13/24 13/24 13/24 D 3 17/24 18/24 16/24 Decoys constructed by other methods: Sternberg and Vakser decoys Limited series of protein–protein structures have been made available by Sternberg (ten series) and Vakser (five series) and coworkers, along with 99 high-quality decoys each.

Publication Year: 2007


A bacterial antirepressor with SH3 domain topology mimics operator DNA in sequestering the repressor DNA recognition helix.

(2010) Nucleic Acids Res 38

PubMed: 20410074 | PubMedCentral: PMC2926617 | DOI: 10.1093/nar/gkq277

( B ) C α -based overlay of the Abl tyrosine kinase SH3 domain (blue; PDB ID: 1JU5), R67-plasmid DHFR (yellow; PDB ID: 1VIE), or chloroplast FTR subunit B (green; PDB ID: 1DJ7) onto CarS1 (red... .

Publication Year: 2010


Functional evolution of two subtly different (similar) folds.

(2001) BMC Struct Biol 1

PubMed: 11782293 | PubMedCentral: PMC64500 | DOI: null

Materials and methods The β-barrel proteins used for the analysis under SH3-fold were SH3 domain of chicken brain spectrin (1SHG), CcdB a topoisomearse poison from E. coli (4VUB), dihydrofolat... reductase (1VIE), diphtheria toxin (1BYM), N-terminal domain of eucaryotic translation initiation factor 5a (1EIF), ferridoxin thioredoxin reductase (1DJ7), DNA-binding domain of HIV-1 integrase (1IHV), nitrile hydratase (1AHJ), PsaE from photosystem I protein (1PSF), ribosomal protein L14 (1WHI), C-terminal domain of ribosomal protein L2 (1RL2), Snrnp (1B34), Sso7d (1BF4), tudor domain (1G5V), myosin S1 motor domain (1D0Z) and BirA (1BIA).

Publication Year: 2001