Citations in PubMed

Primary Citation PubMed: 10074947 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 2

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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A comprehensive update of the sequence and structure classification of kinases.

(2005) BMC Struct Biol 5

PubMed: 15771780 | PubMedCentral: PMC1079889 | DOI: 10.1186/1472-6807-5-6

Multiple sequence alignment for representative sequences of polyphosphate kinase (gi|7465499, Group 11) and the phospholipase D family (PDB|1bys [24]) is shown.

PPK contains two PLD-like subdomains, presumably arranged in the same manner as other PLD superfamily members such as tyrosyl-DNA phosphodiesterase (PDB|1jy1 [ 23 ]) and the homodimer of bacterial endonuclease Nuc from Salmonella typhimurium (PDB|1bys [ 24 ]), which is the closest structural template identified by 3D-Jury [ 16 ].

Publication Year: 2005

Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII.

(2014) Nucleic Acids Res 42

PubMed: 25429979 | PubMedCentral: PMC4267654 | DOI: 10.1093/nar/gku1237

A DALI search ( 35 ) against the Protein Data Bank (PDB) database of protein structures revealed significant structural similarities between the N-terminal domain of R.NgoAVII and several PLD ... ucleases: BfiI REase N-terminal domain (PDB ID: 2C1L, Z-score 12.6); phospholipase D (PDB ID: 1BYS, Z-score 12.3) and Nuc nuclease (PDB ID: 1BYR, Z-score 12.3).

Publication Year: 2014