Primary Citation PubMed: 10074947
Citations in PubMed
This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.
Data mentions are occurrences of PDB IDs in the full text articles from the
PubMedCentral Open Access Subset
of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed.
Article titles can be filtered by keywords and sorted by year.
A comprehensive update of the sequence and structure classification of kinases.
(2005) BMC Struct Biol 5
PubMed: 15771780 | PubMedCentral: PMC1079889 | DOI: 10.1186/1472-6807-5-6
Multiple sequence alignment for representative sequences of polyphosphate kinase (gi|7465499, Group 11) and the phospholipase D family (PDB|1bys ) is shown.
PPK contains two PLD-like subdomains, presumably arranged in the same manner as other PLD superfamily members such as tyrosyl-DNA phosphodiesterase (PDB|1jy1 [ 23 ]) and the homodimer of bacterial endonuclease Nuc from Salmonella typhimurium (PDB|1bys [ 24 ]), which is the closest structural template identified by 3D-Jury [ 16 ].
Publication Year: 2005
Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII.
(2014) Nucleic Acids Res 42
PubMed: 25429979 | PubMedCentral: PMC4267654 | DOI: 10.1093/nar/gku1237
A DALI search ( 35 ) against the Protein Data Bank (PDB) database of protein structures revealed significant structural similarities between the N-terminal domain of R.NgoAVII and several PLD ... ucleases: BfiI REase N-terminal domain (PDB ID: 2C1L, Z-score 12.6); phospholipase D (PDB ID: 1BYS, Z-score 12.3) and Nuc nuclease (PDB ID: 1BYR, Z-score 12.3).
Publication Year: 2014
The RCSB PDB (citation) is managed by two members of the Research Collaboratory for Structural Bioinformatics: Rutgers and UCSD/SDSC
RCSB PDB is a member of the
The RCSB PDB is funded by a grant (DBI-1338415) from the
National Science Foundation, the
National Institutes of Health, and the
US Department of Energy.